Job Description P07024 Confidence 99.52% Date Thu Jan 5 11:00:06 GMT 2012 Rank 23 Aligned Residues 238 % Identity 13% Template c3qg5D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		35	.	.	.	.	40	.	.	.		.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110
Predicted Secondary structure											.			.																																																														.	.
Query SS confidence											.			.																																																														.	.
Query Sequence		T	V	L	H	T	N	D	H	H	.	G	H	.	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	.	.	V	G	Y	D
Query Conservation											.			.																																																														.	.
Alig confidence											.			.																																				.																										.	.
Template Conservation																																																		.
Template Sequence		K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	K	R	E	V	D	L	I	L	L	.	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	T	A	P
Template Known Secondary structure											B	T					T	T	T	S				T																		T	T		S					.				S	B	S		S	S																			T	T	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		111	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	M	A	I	.	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F
Query Conservation						.
Alig confidence						.																									.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		V	V	V	L	P	G	N	H	D	W	K	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	.	.	.	.	.	.	.	.	.	.	V	X	S	F	E	P	V	D	V	E	A	K	R	G	Q	K	V	R	I	L	P	F	.	.	P	Y	P	D	E	S	E	A	L	R	K	N	E	G	D	F	R
Template Known Secondary structure								S			S	T	T													S	S				.	.	.	.	.	.	.	.	.	.			S	S	S							T	T										.	.					S									T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	S	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P	V	C	M	A	A	E	N	K	K	Q	V	D	Y
Query Conservation
Alig confidence																	.	.																											.	.	.	.	.
Template Conservation																	.	.																											.	.	.	.	.
Template Sequence		F	F	L	E	S	R	L	N	K	L	Y	E	E	A	L	.	.	K	K	E	D	F	A	I	F	X	G	H	F	T	V	E	G	L	A	G	Y	R	E	I	I	I	N	.	.	.	.	.	R	A	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	E	I	Q	K	Q	P	L	T	I	Y	P	G
Template Known Secondary structure																	.	.	T		S	S								S			T	T	S										.	.	.	.	.	G	G	G	S		S	S		S						S		S	S							T	T
Template Predicted Secondary structure																	.	.																											.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		V	P	G	T	P	C	K	P	D	.	.	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		S	L	I	R	I	D	F	G	E	E	A	D	E	K	G	A	V	F	V	E	L	K	R	G	E
Template Known Secondary structure			S	S			S	G	G	G	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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