|   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
K | I | T | V | L | H | T | N | D | H | H | G | H | F | W | R | N | . |
. |
. |
. |
. |
. |
E | Y | G | E | Y | G | L | A | A | Q | K | T | L | V | D | G | I | R | K | E | V | A | A | E | G | G | S | V | L | L | L | S | G | G | D | I | N | T | G | V | P | E | S | D | L | . |
. |
. |
. |
. |
Q | D | A | E | P | D | F |
Query Conservation |   |
  |
|
|
|
|   |
|   |
|   |
|
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
N | I | A | F | Y | V | V | S | D | V | H | G | Y | I | F | P | T | D | F | T | S | R | N | Q | Y | Q | P | X | G | L | L | L | A | N | H | V | I | E | Q | D | R | . |
. |
. |
. |
R | Q | Y | D | Q | S | F | K | I | D | N | G | D | F | L | Q | G | S | P | F | C | N | Y | L | I | A | H | S | G | S | S | Q | P | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| T | T |
|
| S | S |
|
| S | S | S | T | T |
|
|
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T | S | S |  |  |  |  |  |  |
| S |
|
| S | S | S | S |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | M | N | L | V | G | Y | D | A | M | A | I | G | N | H | E | F | D | N | P | L | T | V | L | R | Q | Q | E | K | W | A | K | F | P | L | L | S | A | N | I | Y | Q | K | S | T | G | E | R | L | F | K | P | W | A | L | F | K | R | Q | D | L | K | I | A | V | I | G | L | T | T | D | D | T | A | K | I | G | N | P |
Query Conservation |   |
  |   |
|
|   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | F | Y | N | R | X | A | F | D | F | G | T | L | G | N | H | E | F | N | Y | G | L | P | Y | L | K | D | T | L | R | R | L | N | Y | P | V | L | C | A | N | I | Y | E | N | D | S | . |
T | L | T | D | N | G | V | K | Y | F | Q | V | G | D | Q | T | V | G | V | I | G | L | T | T | Q | F | I | P | H | W | E | Q | P |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|
|
|  |  |
|
|
| G | G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |
| B |
|
| S | S |  |  |  | T | T |  | . |  | S | S | S |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| T | T | G | G | G | T | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | F | T | D | I | E | F | R | K | P | A | D | E | A | K | L | V | I | Q | E | L | Q | Q | T | E | K | P | D | I | I | I | A | A | T | H | M | G | H | Y | D | N | G | E | H | G | S | N | A | P | G | D | V | E | M | A | . |
. |
. |
. |
. |
R | A | L | P | A | G | S | L | A | M | I | V | G | G | H | S | Q | D | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
| . | . |   |   |   |
|   |
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |
Template Sequence |   |
E | H | I | Q | S | L | T | F | H | S | A | F | E | I | L | Q | Q | Y | L | P | E | X | K | . |
. |
R | H | A | D | I | I | V | V | C | Y | H | G | G | F | E | K | D | L | E | S | G | T | P | T | E | V | L | T | G | E | N | E | G | Y | A | X | L | E | A | F | S | K | D | I | D | I | F | I | T | G | H | Q | H | R | Q |
Template Known Secondary structure |   |
 |  |  | T | T |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
| S |  |  |  |  |  |  |  |
|
|
| S | B |
| T | T | T |
|
| B | S | S |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  | G | G | G |
| S |  |  |  |
|
| S | S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | |
. | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | C | M | A | A | E | N | K | K | Q | V | D | Y | V | P | G | T | P | C | K | P | D | Q | Q | N | G | I | W | I | V | Q | A | H | E | W | G | K | Y | V | G | R | A | D | F | E | F | . |
R | N | G | E | M | K | M | V | N | Y | Q | L | I | P | V | N | L | K | K | K | V | T | W | E | D | G | K | S | E | R | V | L | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | R | F | K | Q | T | A | V | I | Q | P | G | T | R | G | T | T | V | G | R | V | V | L | S | T | D | E | Y | E | N | L | S | V | E | S | C | E | L | L | P | V | I | D | D | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T |  |  |  |  |  |  |
| S | T | T | S |  |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
236 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | |
. | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | E | I | A | E | N | Q | Q | M | I | S | L | L | S | P | F | Q | N | K | G | K | A | Q | L | E | V | K | I | G | E | T | N | G | R | L | E | G | D | R | D | . |
K | V | R | F | V | Q | T | N | M | G | R | L | I | L | A | A | Q | M | D | R | T | G | A | D | F | A | V | M | S | G | G | G | I | R | D | S | I | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|   |
|
|   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
. | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   | . |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
T | F | T | I | D | E | D | D | Q | H | L | R | K | Q | L | E | D | W | L | D | Y | E | I | T | T | L | P | Y | D | X | T | I | N | H | A | F | E | A | R | V | A | P | H | P | F | T | N | F | X | N | Y | A | L | L | E | K | S | D | A | D | V | A | C | T | A | L | F | D | S | A | S | G | F | . |
Template Known Secondary structure |   |
. | . | . | . | . | . | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S | S |
|  |  |
| S |
| T | T |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
|
| T | T |
|
|  |  | . |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | |
  |
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | |
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
Query Sequence |   |
A | G | D | I | S | Y | K | N | V | L | K | V | Q | P | F | G | N | V | V | V | Y | A | D | M | T | G | K | E | V | I | D | Y | L | T | A | V | A | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | K | P | D | S | G | A | Y | P | Q | F | A | N | V | S | F | V | A | K | . |
. |
. |
. |
. |
D |
Query Conservation |   |
  |
|   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
Template Conservation |   |
  |
|   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|
Template Sequence |   |
K | Q | V | V | T | X | R | D | V | I | N | N | Y | P | F | P | N | T | F | K | V | L | A | V | S | G | A | K | L | K | E | A | I | E | R | S | A | E | Y | F | D | V | K | N | D | E | V | S | V | S | A | D | F | L | E | P | K | P | Q | H | F | N | Y | D | I | Y | G | G | V | S | Y | T | I | H | V | G | R | P | K | G |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  |  | S |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |
| G | G | G | T | S | S | S |
|
| G | G | G |
|  |  |  |  | S |
|  |  |  |  |  | T | T | S |
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
356 | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
  |
  |   |
473 | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | L | N | D | L | K | I | K | G | E | P | V | D | P | A | K | T | Y | R | M | A | T | L | N | F | N | A | T | G | G | D | G | Y | P | R | L | D | N | K | P | G | Y | V | N | T | G | F | I | D | A | E | V | L | K | A | Y | I | Q | K | S | S | P | L | D | V | S | V | Y | E | P | K | G | E | V | S | W | Q |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|
Template Sequence |   |
Q | R | V | S | N | X | X | I | Q | G | H | A | V | D | L | K | Q | T | Y | T | I | C | V | N | N | Y | R | A | V | G | G | G | Q | Y | D | X | Y | I | D | A | P | V | V | K | D | I | Q | V | E | G | A | Q | L | L | I | D | F | L | S | N | N | N | L | X | R | I | P | Q | . |
. |
. |
. |
. |
V | V | D | F | K |
Template Known Secondary structure |   |
S |
|  |  |  |  |  | S | S | S | S | B |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
| G | G | G | T | T |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
436 | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | |
|
|
|
|
. | . | . | . | . |
  |