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Job DescriptionP07024
Confidence100.00%DateThu Jan 5 11:00:06 GMT 2012
Rank6Aligned Residues466
% Identity20%Templatec3qfkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized protein; PDBTitle: 2.05 angstrom crystal structure of putative 5'-nucleotidase from2 staphylococcus aureus in complex with alpha-ketoglutarate
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40......... 50.........60.........70.........80.........90.... .....100.
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Query Sequence  KITVLHTNDHHGHFWRN. . . . . . EYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDL. . . . . QDAEPDF
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Template Sequence  NIAFYVVSDVHGYIFPTDFTSRNQYQPXGLLLANHVIEQDR. . . . RQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV
Template Known Secondary structure 


TT

SS

SSSTT


S
S....TTSS
S

SSSSTT
SS
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   3......10.........20.........30.........40... ......50.........60.........70........
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  RGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP
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Template Sequence  DFYNRXAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDS. TLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQP
Template Known Secondary structure  T





GGGGTT

SS
B

SSTT.SSS
STT
TTGGGTS
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   7980.........90.........100.........110.........120.... .....130.........140.........150.......
 
   182.......190.........200.........210.........220.........230....... ..240.........250......
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Query Sequence  EYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMA. . . . . RALPAGSLAMIVGGHSQDP
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Template Sequence  EHIQSLTFHSAFEILQQYLPEXK. . RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAXLEAFSKDIDIFITGHQHRQ
Template Known Secondary structure  TT

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S


SB
TTT

BSS

SSS

GGG
S

SS

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   158.160.........170.........180 .........190.........200.........210.........220.........230.....
 
   257..260.........270.........280.........290.........300.. .......310.........320.........330.....
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Query Sequence  VCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEF. RNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLY
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Template Sequence  I. . . . . . . . . . . . . . . . . . . AERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDS. . . . . . . . . . . . . .
Template Known Secondary structure  ...................TT
STTS
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   236 ...240.........250.........260.........270.........280..
 
   336...340.........350.........360.........370...... ...380.........390.........400.........410....
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Query Sequence  TPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD. KVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIE
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Template Sequence  . . . . . . TFTIDEDDQHLRKQLEDWLDYEITTLPYDXTINHAFEARVAPHPFTNFXNYALLEKSDADVACTALFDSASGF.
Template Known Secondary structure  ......T



T

SS

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TT

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   283......290.........300.........310.........320.........330.........340.........350.....
 
   415....420.........430.........440.........450.. .......460.........470. .
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Query Sequence  AGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQ. . . . . . . . . . . . . . . . . MKPDSGAYPQFANVSFVAK. . . . . D
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Template Sequence  KQVVTXRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKG
Template Known Secondary structure 
SS
S


TTTT
GGGTSSS

GGG
S
TTS
TT
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   356...360.........370.........380.........390.........400.........410.........420.........430.....
 
   473......480.........490.........500.........510.........520.........530.........540.........550
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Query Sequence  GKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ
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Template Sequence  QRVSNXXIQGHAVDLKQTYTICVNNYRAVGGGQYDXYIDAPVVKDIQVEGAQLLIDFLSNNNLXRIPQ. . . . . VVDFK
Template Known Secondary structure  S
SSSSB

TTSTTTTT
GGGTT





SS




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   436...440.........450.........460.........470.........480.........490.........500... .....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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