Job Description P07024 Confidence 100.00% Date Thu Jan 5 11:00:06 GMT 2012 Rank 5 Aligned Residues 465 % Identity 24% Template c3ivdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		T	Y	K	I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	.	.	.	.	.	.	.	.	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		A	K	D	V	T	I	I	Y	T	N	D	L	H	A	H	V	E	P	Y	K	V	P	W	I	A	D	G	K	R	D	I	G	G	W	A	N	I	T	T	L	V	K	Q	E	K	.	.	.	.	A	K	N	K	A	T	W	F	F	D	A	G	D	Y	F	T	G	P	Y	I	S	S	L	T	K	G	K	A	I	I	D
Template Known Secondary structure														T	T			S		B			T	T	S	G	G	G	T	S		B															.	.	.	.				S	S							S			S	S	S	S					T	T	T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180
Predicted Secondary structure																																																				.																								.
Query SS confidence																																																				.																								.
Query Sequence		G	M	N	L	V	G	Y	D	A	M	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	.	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	.	A	K	I	G	N
Query Conservation																																																				.																								.
Alig confidence																																																				.																								.
Template Conservation
Template Sequence		I	X	N	T	X	P	F	D	A	V	T	I	G	N	H	E	F	D	H	G	W	D	N	T	L	L	Q	L	S	Q	A	K	F	P	I	V	Q	G	N	I	F	Y	Q	N	S	S	K	S	F	W	D	K	P	Y	T	I	I	E	K	D	G	V	K	I	G	V	I	G	L	H	G	V	F	A	F	N	D	T	V	S
Template Known Secondary structure				T	T	S			S						G	G	G	G	T	T										T	T		S	S		B				S				T	T	S	S		B	S	S	S		S							T	T																		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		P	E	Y	F	T	D	I	E	F	R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	S	N	A	P	.	.	.	.	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P
Query Conservation																																																					.	.	.	.
Alig confidence																										.	.																										.	.	.	.
Template Conservation																										.	.
Template Sequence		A	A	T	R	V	G	I	E	A	R	D	E	I	K	W	L	Q	R	Y	I	D	E	L	K	.	.	G	K	V	D	L	T	V	A	L	I	H	E	G	V	P	A	R	Q	S	S	X	G	G	T	D	V	R	R	A	L	D	K	D	I	Q	T	A	S	Q	V	K	G	L	D	I	L	I	T	G	H	A	H	V	G
Template Known Secondary structure		G	G	G	S	T	T																		T	.	.	T	T		S									S	S						S	S	G	G	G	S	S															S	S								S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	M	A	A	E	N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G	K	Y	V	G	R	A	D	F	E	F	R	N	G	E	M	K	M	V	N	Y	Q	L	I	P	V	N	L	K	K	K	V	T	W	E	D	G	K	S	E	R	V	L	Y	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	I	K	V	G	N	T	L	I	L	S	T	D	S	G	G	I	D	V	G	K	L	V	L	D	Y	K	E	K	P	H	N	F	T	V	K	N	F	E	L	K	T	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T								S	T	T	S											T	T	T	T													B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.																		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		P	E	I	A	E	N	Q	Q	M	I	S	L	L	S	P	F	Q	N	K	G	K	A	Q	L	E	V	K	I	G	E	T	N	G	R	L	E	G	D	R	D	K	V	R	F	V	Q	T	N	M	G	R	L	I	L	A	A	Q	M	D	R	T	G	.	.	A	D	F	A	V	M	S	G	G	G	I	R	D	S	I	E
Query Conservation																																																																.	.
Alig confidence																																					.	.	.	.																								.	.
Template Conservation																																					.	.	.	.
Template Sequence		D	E	W	K	P	D	Q	Q	T	K	Q	V	I	D	G	W	N	K	K	L	D	E	V	V	Q	Q	T	V	A	Q	S	P	V	E	L	.	.	.	.	K	R	A	Y	G	E	S	A	S	L	G	N	L	A	A	D	A	L	L	A	A	A	G	K	N	T	Q	L	A	L	T	N	S	G	G	I	R	N	E	I	P
Template Known Secondary structure		G	G																							T							S	S		B	.	.	.	.				S	S	S																		T	T								G	G	G			S		B
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.						.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		A	G	D	I	S	Y	K	N	V	L	K	V	Q	P	F	G	N	V	V	V	Y	A	D	M	T	G	K	E	V	I	D	Y	L	T	A	V	A	Q	M	K	P	D	S	G	A	Y	P	Q	F	A	N	V	S	F	V	A	K	.	.	.	.	.	D	G	K	L	N	D	L	K	I	K	G	E	P	V	D	P	A	K
Query Conservation																																																											.	.	.	.	.
Alig confidence																																										.	.																.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		A	G	A	I	T	X	G	G	V	I	S	T	F	P	F	P	N	E	L	V	T	X	E	L	T	G	K	Q	L	R	S	L	X	E	H	G	A	S	L	S	.	.	N	G	V	L	Q	V	S	K	G	L	E	X	K	Y	D	S	S	K	P	V	G	Q	R	V	I	T	L	T	L	N	G	K	P	I	E	D	A	T
Template Known Secondary structure		S												S																									T		S	.	.	S							T	T							T	T	S		T	T	S								T	T					T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	Y	R	M	A	T	L	N	F	N	A	T	G	G	D	G	Y	P	R	L	D	N	K	P	G	Y	.	V	N	T	G	F	I	D	A	E	V	L	K	A	Y	I	Q	K	S	S	P	L	D	V	S
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		V	Y	H	I	A	T	Q	S	F	L	A	D	G	G	D	G	F	T	A	F	T	E	G	K	A	R	N	I	T	G	G	Y	Y	V	Y	H	A	V	V	D	Y	F	K	A	G	N	T	I	T	D	E
Template Known Secondary structure													T	T	G	G	G		G	G	G	G	G																						T	T
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.