Job Description P07024 Confidence 100.00% Date Thu Jan 5 11:00:06 GMT 2012 Rank 2 Aligned Residues 479 % Identity 30% Template c2z1aA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase; PDBTitle: crystal structure of 5'-nucleotidase precursor from thermus2 thermophilus hb8 Resolution 1.75 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.								.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		Y	K	I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	.	.	.	.	.	.	.	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		F	T	L	T	L	V	H	T	N	D	T	H	A	H	L	E	P	V	E	L	T	L	S	G	E	K	T	P	V	G	G	V	A	R	R	V	A	L	F	D	R	V	W	.	.	.	.	A	R	A	K	N	P	L	F	L	D	A	G	D	V	F	Q	G	T	L	Y	F	N	Q	Y	R	G	L	A	D	R	Y	F	M
Template Known Secondary structure													T	T			S							S	S	S																			.	.	.	.			S	S	S							S			S	S	S	S							T	T
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		N	L	V	G	Y	D	A	M	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	.	.	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		H	R	L	R	Y	R	A	M	A	L	G	N	H	E	F	D	L	G	P	G	P	L	A	D	F	L	K	G	A	R	F	K	V	V	S	A	N	V	D	A	S	R	E	P	R	L	K	G	L	F	A	P	Y	A	V	V	V	V	G	G	E	R	V	G	I	I	G	L	T	T	P	D	T	R	E	I	S	N	P	G
Template Known Secondary structure				T	T								G	G	G	G	T	T										T	T			S					T	T				T	T		G	G	G	T	T	S		B	S							T	T											T	T					S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	T	D	I	E	F	R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	S	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H	S	Q	D	P	V	C	M	A	A	E
Query Conservation
Alig confidence		.	.																						.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																						.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	T	V	A	F	L	D	P	Y	E	S	A	Q	K	A	V	Y	E	L	L	A	.	K	G	V	N	K	I	V	V	L	S	H	L	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	E	D	L	K	L	A	R	R	L	V	G	V	Q	V	I	V	G	G	H	S	H	T	L	L	G	S	F	P	H
Template Known Secondary structure		.	.	T	T																				.	T	T										S			.	.	.	.	.	.	.	.	.	.	.	.								T	T		S	S								S	S				B	S			S
Template Predicted Secondary structure		.	.																						.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.													.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G	K	Y	V	G	R	A	D	F	E	F	R	N	G	E	M	K	M	V	N	Y	Q	L	I	P	V	N	L	K	K	K	V	T	W	E	D	G	K	S	E	R	V	L	Y	T	P	E	I	A	E	N
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	L	S	P	A	G	P	Y	P	T	V	V	K	N	P	E	G	K	D	V	L	V	V	Q	A	W	E	W	G	K	V	V	G	L	L	E	V	T	F	D	A	K	G	E	L	L	A	Y	K	G	E	A	L	L	M	T	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	E	D
Template Known Secondary structure		T	T				S	B		S	S						T	T	S										S	T	T	S											T	T	S													S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																	.	310	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		Q	Q	M	I	S	L	L	S	P	F	Q	N	K	G	K	A	Q	L	E	V	K	I	G	E	T	N	G	R	L	E	G	D	R	D	K	V	R	F	V	Q	T	N	M	G	R	L	I	L	A	A	Q	M	D	R	T	.	.	.	G	A	D	F	A	V	M	S	G	G	G	I	R	D	S	I	E	A	G	D	I	S
Query Conservation																																																									.	.	.
Alig confidence																																																									.	.	.
Template Conservation
Template Sequence		F	F	A	K	E	A	L	L	A	Y	A	Q	P	V	M	A	L	M	Q	Q	V	I	A	E	A	K	V	D	L	V	G	E	R	A	V	V	R	R	R	E	S	N	L	G	N	L	I	T	D	G	M	L	W	K	T	R	N	A	G	T	Q	I	A	L	Q	N	G	G	G	I	R	A	S	I	P	K	G	P	I	T
Template Known Secondary structure													G	G	G												S	S		B								T	T	S																T	G	G	G	T								G	G	G					B		S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.						.	.	.	.	.	.	.	.	480	.	.	.					.	.	.	.	.	.
Predicted Secondary structure																																				.																			.	.	.	.	.													.	.	.	.
Query SS confidence																																				.																			.	.	.	.	.													.	.	.	.
Query Sequence		Y	K	N	V	L	K	V	Q	P	F	G	N	V	V	V	Y	A	D	M	T	G	K	E	V	I	D	Y	L	T	A	V	A	Q	M	.	K	P	D	S	G	A	Y	P	Q	F	A	N	V	S	F	V	A	K	.	.	.	.	.	D	G	K	L	N	D	L	K	I	K	G	E	.	.	.	.	P	V	D	P	A	K
Query Conservation																																				.																			.	.	.	.	.													.	.	.	.
Alig confidence																																				.																			.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		V	G	K	V	Y	E	V	L	P	F	G	N	T	L	V	V	M	D	L	K	G	K	E	I	L	A	A	L	E	N	G	V	S	Q	W	E	N	T	A	G	R	F	L	Q	V	S	G	L	R	Y	A	F	D	L	S	R	P	A	G	S	R	V	V	R	V	E	V	K	T	E	K	G	Y	V	P	L	D	L	E	A
Template Known Secondary structure									S		S																							T	T	G	G	G	T		T	T						S							T	T	S		T	T	S										T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		T	Y	R	M	A	T	L	N	F	N	A	T	G	G	D	G	Y	P	R	L	D	N	K	P	G	Y	V	.	N	T	G	F	I	D	A	E	V	L	K	A	Y	I	Q	K	S	S	P	L	D	V	S	V	Y	E	P	K	G	E	V	S
Query Conservation																													.
Alig confidence																													.																									.	.	.
Template Conservation																																																						.	.	.
Template Sequence		T	Y	R	V	V	V	N	N	F	I	A	N	G	G	D	G	F	T	V	L	K	E	A	Q	G	Y	R	V	D	T	G	F	S	D	A	E	S	F	M	D	Y	L	K	E	L	K	V	V	E	A	G	L	.	.	.	E	G	R	I	E
Template Known Secondary structure													T	T	G	G	G						T			S																					S							.	.	.		S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.