Job Description P80645 Confidence 100.00% Date Thu Jan 5 12:33:15 GMT 2012 Rank 3 Aligned Residues 350 % Identity 22% Template c3sdoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase; PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	N	M	F	W	F	L	P	T	.	.	.	H	G	D	G	H	Y	L	G	T	E	E	G	S	R	P	V	D	H	G	Y	L	Q	Q	I	A	Q	A	A	D	R	L	G	Y	T	G	V	L	I	P	T	G	R	S	.	.	.	.	.	.	.	.	.	.	.	C	E	D	A	W	L	V	A	A	S	M	I	P
Query Conservation												.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	H	F	G	V	L	I	Q	G	A	G	A	N	M	N	A	W	K	H	P	S	V	P	P	D	A	S	V	N	F	D	F	Y	V	D	R	A	R	R	A	E	N	A	G	I	A	F	A	F	I	A	D	S	A	Y	V	T	P	K	S	A	P	H	F	L	N	R	F	E	P	I	S	L	L	S	A	L	A	V
Template Known Secondary structure											T	T		S	S	T	T	G	G	G	S	T	T	S		T	T	G	G	G															T	T														T	T	S						S													T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																								.																									.
Query SS confidence																																																								.																									.
Query Sequence		V	T	Q	R	L	K	F	L	V	A	L	R	P	S	V	T	S	P	T	V	A	A	R	Q	A	A	T	L	D	R	L	S	N	G	R	A	L	F	N	L	V	T	G	S	D	P	Q	E	L	A	G	D	G	V	.	F	L	D	H	S	E	R	Y	E	A	S	A	E	F	T	Q	V	W	R	R	L	L	Q	R	.
Query Conservation																																																								.																									.
Alig confidence																																																								.																									.
Template Conservation
Template Sequence		L	T	S	K	I	G	L	V	G	T	M	S	S	S	Y	S	E	P	Y	N	V	A	R	Q	F	A	S	L	D	L	I	S	G	G	R	A	G	W	N	V	V	T	S	S	I	E	G	T	G	K	N	Y	G	R	P	H	P	D	H	A	Q	R	Y	A	I	A	A	E	H	L	D	V	V	Q	G	L	W	D	S	W
Template Known Secondary structure		T		S	S									S	S	S	S																T	T	S								S	S			T	T	G	G	G	G	T	T		S	S			S	T	T																	T	S	B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																						146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	V	D	F	N	G	K	H	I	H	V	R	G	A	K	L	L	F	P	A	I	Q	Q	P	Y	P	P	L	Y	F	G	G	S	S	D	V	A	Q	E	L	A	A	E	Q	V	D	L	Y	L	T	W	G	E	P	P	E	L	V	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																										.
Template Sequence		D	D	D	A	L	V	R	D	R	A	T	G	R	F	F	D	P	D	K	L	H	R	L	D	H	R	G	R	F	F	S	V	E	G	P	L	N	I	R	R	.	S	P	Q	G	Q	P	V	I	F	Q	A	G	S	S	D	D	G	I	D	L	A	G	R	S	A	D	A	V	F	S	N	G	S	T	F	D	E	A	R
Template Known Secondary structure			T	T					B	T	T	T	T	B				G	G	G	B								S	S								S	S			.	B	T	T	B	S									S												S							S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		E	K	I	E	Q	V	R	A	K	A	A	A	H	G	R	K	I	.	.	.	R	F	G	I	R	L	H	V	I	V	R	E	T	N	D	E	A	W	Q	A	A	E	R	L	I	S	H	L	D	D	E	T	I	A	K	A	Q	A	A	F	A	R	T	D	S	V	G	Q	Q	R	M	A	A	L	H	N	G	K	R	D
Query Conservation																			.	.	.
Alig confidence																			.	.	.																																																										.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	F	Y	R	R	V	K	A	A	A	A	A	A	G	R	N	P	D	H	V	K	V	F	P	G	I	G	P	I	V	G	A	T	Q	Q	E	A	D	D	K	Y	R	Q	V	R	D	L	L	S	P	R	E	A	L	A	Y	L	S	H	F	F	Q	Q	H	D	F	S	V	L	R	E	V	A	Y	E	G	T	.	.	.
Template Known Secondary structure														T	T	S		G	G	G	S												S	S													T	T	S													T	T	T			T	T											.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.
Predicted Secondary structure																																										.																															.	.	.
Query SS confidence																																										.																															.	.	.
Query Sequence		N	L	E	I	S	P	N	L	W	A	G	V	G	L	V	R	G	G	A	G	T	A	L	V	G	D	G	P	T	V	A	A	R	I	N	E	Y	A	A	L	.	G	I	D	S	F	V	L	S	G	Y	P	H	L	E	E	A	Y	R	V	G	E	L	L	F	P	L	L	D	V	A	.	.	.	I	P	E	I	P	Q
Query Conservation																																										.																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	F	I	G	T	P	E	A	V	A	S	E	M	I	R	W	V	D	E	G	A	A	D	G	F	M	L	G	L	P	V	T	G	F	G	L	D	D	F	V	D	H	V	L	P	V	L	S	A	R	G	Y	F	D	P	V	R	R	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T																	T	T	S		S							S	S	T	T										T							T	T	S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		359	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	Q	P	L	N	P	Q	G	E	A	.	V	A	N	D	F	I
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		A	T	L	R	D	H	L	G	L	P	Y	K	E	S	R	Y	A
Template Known Secondary structure		S	S					T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions