Job Description P80645 Confidence 40.12% Date Thu Jan 5 12:33:15 GMT 2012 Rank 43 Aligned Residues 146 % Identity 16% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.													.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	Y	P	P	L	Y	F	G	G	S	S	D	V	A	Q	E	L	A	A	E	Q	V	D	L	Y	L	T	W	G	E	P	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	V	K	E	K	I	E	Q	V	R	A	K	A	A	A	H	G	R	K	I	R	F	G	I	R	L	H	V	I	V	R	E	T	N
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																				.
Template Sequence		A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	.	V	V	A	D	L	P	F	G	T	Y	G	T	P
Template Known Secondary structure		T	T										S										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S		.							T	T	S		S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		D	E	A	W	Q	A	A	E	R	L	I	S	H	L	D	D	E	T	I	A	K	A	Q	A	A	F	A	R	T	D	S	V	G	Q	Q	R	M	A	A	L	H	N	G	K	R	D	N	L	E	I	S	P	N	L	W	A	G	V	G	L	V	R	G	G	A	G	T	A	L	V	G	.	.	.	.	D	G	P	T	V
Query Conservation																																																																									.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	F	A	S	A	V	K	L	M	R	.	.	.	.	.	.	.	.	.	.	.	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	P	V	C	A	H	V	G	L	G	A	A	Q	L
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	T	T		S								G	G	G										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	I	N	E	Y	A	A	L	G	I	D	S	F	V	L	S	G	Y	P	H	L	E	E	A	Y	R	V	G	E	L	L
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	T	.	L	V	A	A	E	V	T	R	E	L
Template Known Secondary structure												T		S						S				.
Template Predicted Secondary structure																								.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions