Job Description P80645 Confidence 48.55% Date Thu Jan 5 12:33:15 GMT 2012 Rank 39 Aligned Residues 122 % Identity 17% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		G	T	E	E	G	S	R	P	V	D	H	G	Y	L	Q	Q	I	A	Q	A	A	D	R	L	G	Y	T	G	V	L	I	P	T	G	R	S	C	E	D	A	W	L	V	A	A	S	M	I	P	V	T	Q	R	L	.	K	F	L	V	A	L	R	P	S	V	T	S	P	T	V	A	A	R	Q	A	A	T	L	D	R
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y	E	V	S	L	G	D	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E
Template Known Secondary structure		T		B	T	T	T	B																	T	T		S							S	S	S															T	T	T	S		G	G	G						B		T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		98	.	100	.	.	.	.				.	.	.	.									.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure									.	.	.					.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence									.	.	.					.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		L	S	N	G	R	A	L	.	.	.	F	N	L	V	.	.	.	.	.	.	.	.	T	G	S	D	P	Q	E	.	.	.	.	.	L	A	G	D	G	V	F	L	D	H	S	E	R	Y	E	A	S	A	E	F	T	Q	V	W	R	R	L	L
Query Conservation									.	.	.					.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence					.				.	.	.					.	.	.	.	.	.	.	.								.	.	.	.	.													.	.
Template Conservation					.																																											.	.
Template Sequence		G	I	A	.	V	F	D	S	S	V	A	G	L	G	G	C	P	Y	A	K	G	A	T	G	N	V	A	S	E	D	V	L	Y	L	L	N	G	L	E	I	H	T	G	V	D	M	.	.	H	A	L	V	D	A	G	Q	R	I	C	A	V	L
Template Known Secondary structure		T			.					B	G	G	G			B		G	G	G	T	T		B		B		B											T	T		B						.	.
Template Predicted Secondary structure					.																																											.	.
Template SS confidence
		226	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions