Job Description P80645 Confidence 100.00% Date Thu Jan 5 12:33:15 GMT 2012 Rank 9 Aligned Residues 320 % Identity 20% Template c1z69D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:coenzyme f420-dependent n(5),n(10)- PDBTitle: crystal structure of methylenetetrahydromethanopterin2 reductase (mer) in complex with coenzyme f420 Resolution 2.61 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		L	N	M	F	W	F	L	P	T	H	G	D	G	H	Y	L	G	T	E	E	G	S	R	P	V	D	H	G	Y	L	Q	Q	I	A	Q	A	A	D	R	L	G	Y	T	G	V	L	I	P	T	G	R	S	C	E	D	A	W	L	V	A	A	S	M	I	P	V	T	Q	R	L	K	F	L	V	A	L	.	R	P	S
Query Conservation																																																																														.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	F	G	I	E	F	V	P	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	I	A	Y	Y	A	K	L	S	E	Q	Q	G	F	D	H	V	W	I	T	D	H	Y	N	N	R	D	V	Y	S	T	L	T	V	L	A	L	N	T	N	S	I	K	I	G	P	G	V	T	N	S	Y
Template Known Secondary structure										T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		S								T	T	S	S												T		S	S	S					S				S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.															.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	S	P	T	V	A	A	R	Q	A	A	T	L	D	R	L	S	N	G	R	A	L	F	N	L	V	T	G	S	D	P	Q	E	L	A	G	D	G	V	F	L	D	H	S	E	R	Y	E	A	S	A	E	F	T	Q	V	W	R	R	L	L	Q	R	E	T	V	D	F	N	G	K	H	I	H	V	R	G	A	K
Query Conservation
Alig confidence																																.									.	.
Template Conservation																																.									.	.
Template Sequence		T	R	N	P	A	I	T	A	S	S	I	A	S	I	A	E	I	S	G	G	R	A	V	L	G	L	G	P	G	D	.	K	A	T	F	D	A	M	G	.	.	I	A	W	K	K	P	L	A	T	T	K	E	A	I	Q	A	I	R	D	F	I	S	G	K	K	V	S	M	D	G	E	M	I	K	F	A	G	A	K
Template Known Secondary structure		S	S																	T	S		B									.								T	.	.																						T	T								S	S
Template Predicted Secondary structure																																.									.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		L	L	F	P	A	I	Q	Q	P	Y	P	P	L	Y	F	G	G	S	S	D	V	A	Q	E	L	A	A	E	Q	V	D	L	Y	L	T	W	G	E	P	P	E	L	V	K	E	K	I	E	Q	V	R	A	K	A	A	A	H	G	R	K	I	.	.	.	R	F	G	I	R	L	H	V	I	V	R	E	T	N	D	E
Query Conservation																																																															.	.	.
Alig confidence							.	.	.																																																						.	.	.
Template Conservation							.	.	.
Template Sequence		L	A	F	K	A	.	.	.	G	N	I	P	I	Y	M	G	A	Q	G	P	K	M	L	E	L	A	G	E	I	A	D	G	V	L	I	N	A	S	H	P	K	D	F	E	V	A	V	E	Q	I	K	K	G	A	E	K	A	G	R	D	P	S	E	V	D	V	T	A	Y	A	C	F	S	I	D	K	D	P	V	K
Template Known Secondary structure			S	S			.	.	.											S												S								S																			T			G	G	G	S												S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		144	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	Q	A	A	E	R	L	I	S	H	L	D	D	E	T	I	A	K	A	Q	A	A	F	A	R	T	D	S	V	G	Q	Q	R	M	A	A	L	H	N	G	K	R	D	N	L	E	I	S	P	N	L	W	A	G	V	G	L	V	R	G	G	A	G	T	A	L	V	G	D	G	P	T	V	A	A	R	I	N	E
Query Conservation
Alig confidence																																																														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		A	V	N	A	A	K	V	V	V	A	F	I	V	A	G	S	P	D	L	V	L	E	R	H	G	I	P	V	E	A	K	S	Q	I	G	A	A	I	A	K	G	D	F	G	A	L	M	G	G	L	V	T	P	Q	M	I	E	A	F	S	.	.	.	.	.	.	I	C	G	T	P	D	D	C	M	K	R	I	K	D
Template Known Secondary structure															T	T	S								T	T			T	T											T	T							T	T	T	S										.	.	.	.	.	.				S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280							.	.	.	.	.	.	.	.	.	290	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		Y	A	A	L	G	I	D	S	F	V	L	S	.	.	.	G	Y	P	H	L	E	E	A	Y	R	V	G	E	L	L	F	P	L
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		L	E	A	I	G	V	T	Q	I	V	A	G	S	P	I	G	P	A	K	E	K	A	I	K	L	I	G	K	E	I	I	A	K
Template Known Secondary structure						T											S	S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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