Return to main results Retrieve Phyre Job Id

Job DescriptionP80645
Confidence65.01%DateThu Jan 5 12:33:15 GMT 2012
Rank31Aligned Residues105
% Identity13%Templatec1rcxH_
PDB info PDB header:lyase (carbon-carbon)Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   245....250.........260.........270.........280.........290.........300.........310.........320....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  RLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGI
Query Conservation                                                              





 


 
    
 

Alig confidence 















































































Template Conservation     
 
 

 
 



 




 
  
   
 



 
  


 

  


   


 



     
 


  
 
 

Template Sequence  KNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGV
Template Known Secondary structure  TT
S

TT
SSBTTB
SS




SST
Template Predicted Secondary structure 



























Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   325....330 .........340..... ....
Predicted Secondary structure 

....



.
Query SS confidence 





. . . .














.



Query Sequence  DSFVLS. . . . GYPHLEEAYRVGELL. FPLL
Query Conservation 
   
 ....     
    
  

.

 
Alig confidence 





....














.



Template Conservation     

     
  

  
        


 
Template Sequence  PIVMHDYLTGGFTANTTLSHYCRDNGLLLH
Template Known Secondary structure  S
T
Template Predicted Secondary structure 








Template SS confidence 





























   263......270.........280.........290..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions