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Job DescriptionP77044
Confidence99.64%DateThu Jan 5 12:25:30 GMT 2012
Rank135Aligned Residues244
% Identity11%Templatec3k2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acyl-coenzyme a thioesterase 4; PDBTitle: human acyl-coenzyme a thioesterase 4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  AATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSR
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Template Sequence  PPGVWRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYR. . . . . ASLLAGHGFATLALAYYNFEDLPNNMDNISL
Template Known Secondary structure 
TT
TT
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B


TT
S


.....TTT

SSSTTS
SS
S
T
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   131........140.........150.........160.........170.... .....180.........190.........200.....
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  SDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIE
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Template Sequence  EYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYK. . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSTTB

SST
SSS

SB

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   206...210.........220.........230.........240.........250.........260........
 
   174.....180.........190.........200.........210.........220.........230.........240.........250 ..
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Query Sequence  NLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMD. AG
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Template Sequence  . . . . . . . . . . . . . HSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYA
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B
GGG

TTS

TT
B


TTGGGSTTB

GGG

S
TT
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   269270.........280.........290.........300.........310.........320.........330.....
 
   253...... 260.........270... ......280.........290..
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Query Sequence  LRLLSGI. . . . . AGSELHIFRDCGHW. . . . . . . . . . . . . . . . . . . . . . . . . . . . AQWEHADAFNQLVLNFLAR
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Template Sequence  QTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCK
Template Known Secondary structure  TT



TT

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   336...340.........350.........360.........370.........380.........390.........400........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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