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Job DescriptionP77044
Confidence99.82%DateThu Jan 5 12:25:30 GMT 2012
Rank114Aligned Residues245
% Identity11%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  QGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLG
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Template Sequence  VARKTLFMLPDGGGSAFSYASLPR. L. . . . KSDTAVVGLNCPYARDPENMNCTH. . GAMIESFCNEIRRRQPRGPYHLGG
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   1863......1870.........1880...... . ..1890.........1900.........1910. ........1920.........1930.....
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  NSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEAR
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Template Sequence  WSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVD
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   1936...1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010.....
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  LNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWE
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Template Sequence  VMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPG. . ASFDIVRADGANHFTLMQ
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   2016...2020.........2030.........2040.........2050.........2060.........2070..... ....2080.........2090...
 
   278. 280.........290.
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Query Sequence  HA. . DAFNQLVLNFLA
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Template Sequence  KEHVSIISDLIDRVMA
Template Known Secondary structure  TTTTT
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   2094.....2100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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