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Job DescriptionP77044
Confidence98.98%DateThu Jan 5 12:25:30 GMT 2012
Rank209Aligned Residues224
% Identity17%Templatec3e4dD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:esterase d; PDBTitle: structural and kinetic study of an s-formylglutathione2 hydrolase from agrobacterium tumefaciens
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30...... ...40.........50.........60.........70.........80.........90.
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Query Sequence  RFLNVEEAGKTLRIHFNDC. . . . . . GQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSG
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Template Sequence  GVFSHQSETLKSEXTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVXEKGEYRRXASELGLVVVCPDTSPRGNDVPDELTN
Template Known Secondary structure  TTTT
GGGGTS


TT

SS

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SSSS


TT
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   92. ......100.........110.........120.........130.........140......
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Query Sequence  SR. . . . . . . . . . . . . . . . . . . . . . . . . SDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGT
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Template Sequence  WQXGKGAGFYLDATEEPWSEHYQXYSYVTEELPALIGQHFRADXSRQSIFGHSXGGHGAXTIALKNPERFKSCSAFAPIV
Template Known Secondary structure  TTSBTTB
TTSB

STTGGGT
BTSSBT
TTT
S
BS

S
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   147..150.........160.........170.........180.........190.........200.........210.........220......
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Query Sequence  GGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFG
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Template Sequence  APSSADWSEPALEKYLGADRAAWRRYDACSLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
GGG
TTT
S
TTTTGGG
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   175....180.........190.........200......
 
   227..230.........240.........250 .........260. ........270.........280.........290..
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Query Sequence  PRLAEIKAQTLIVWGRNDRFVPMD. AGLRLLSGIAG. . . . SELHIFRDCGHWAQWEHADAFNQLVLNFLAR
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Template Sequence  . EDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRXHDRYDHS. . YYFISTFXDDHLKWHAE
Template Known Secondary structure  .TT


STT
TTT
TTTTS

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   207..210.........220.........230.........240.........250....... ..260.........270....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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