Job Description P77044 Confidence 99.98% Date Thu Jan 5 12:25:30 GMT 2012 Rank 65 Aligned Residues 265 % Identity 15% Template c2yysA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:proline iminopeptidase-related protein; PDBTitle: crystal structure of the proline iminopeptidase-related protein2 ttha1809 from thermus thermophilus hb8 Resolution 2.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.
Predicted Secondary structure																							.																																																	.	.
Query SS confidence																							.																																																	.	.
Query Sequence		F	L	N	V	E	E	A	G	K	T	L	R	I	H	F	N	D	C	G	Q	G	.	D	E	T	V	V	L	L	H	G	S	G	P	G	A	T	G	W	A	N	F	S	R	N	I	D	P	L	V	E	A	G	Y	R	V	I	L	L	D	C	P	G	W	G	K	S	D	S	V	.	.	V	N	S	G	S	R	S	D
Query Conservation																							.																																																	.	.
Alig confidence						.	.	.	.														.																			.	.	.																												.	.
Template Conservation						.	.	.	.																																	.	.	.
Template Sequence		Y	V	P	V	.	.	.	.	G	E	A	E	L	Y	V	E	D	V	G	P	V	E	G	P	A	L	F	V	L	H	G	G	P	G	G	N	A	Y	V	L	.	.	.	R	E	G	L	Q	D	Y	L	E	G	F	R	V	V	Y	F	D	Q	R	G	S	G	R	S	L	E	L	P	Q	D	P	R	L	F	T	V	D
Template Known Secondary structure						.	.	.	.	S	S									S		T	T	S									T	T	T			S				.	.	.					G	G	G		T	T	S								T	T	S	T	T	S					S		G	G	G
Template Predicted Secondary structure						.	.	.	.																																	.	.	.
Template SS confidence
		7	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	R	I	L	K	S	V	V	D	Q	L	D	I	A	K	I	H	L	L	G	N	S	M	G	G	H	S	S	V	A	F	T	L	K	W	P	E	R	V	G	K	L	V	L	M	G	G	G	T	G	G	M	S	L	F	T	P	M	P	T	E	G	I	K	R	L	N	Q	L	Y	R	Q	P	T	I	E	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V	E	D	T	L	L	L	A	E	A	L	G	V	E	R	F	G	L	L	A	H	G	F	G	A	V	V	A	L	E	V	L	R	R	F	P	Q	A	E	G	A	I	L	L	A	P	W	V	N	F	P	W	L	A	A	R	L	A	E	A	A	G	L	A	P	L	P	D	P	E	E	N	L	K	E	A	L	K
Template Known Secondary structure														T	T			S							T	T													T	T								S				B												T	T					S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		K	L	M	M	D	I	F	V	F	D	T	S	D	L	T	.	D	A	L	F	E	A	R	L	N	N	M	L	S	R	R	D	H	L	E	N	F	V	K	S	L	E	A	N	P	K	Q	F	P	D	F	G	P	R	L	A	E	I	K	A	Q	T	L	I	V	W	G	R	N	D	R	F	V	P	M	D	A	G	L	R
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		R	E	E	P	K	A	L	F	D	R	L	M	F	P	T	P	R	G	R	M	A	Y	E	W	L	A	E	G	A	G	I	L	G	S	D	A	P	G	L	A	F	L	R	N	G	L	W	R	L	D	Y	T	P	Y	L	T	P	E	R	R	P	L	Y	V	L	V	G	E	R	D	G	T	S	Y	P	Y	A	E	E	V
Template Known Secondary structure			S												S	S														T	T					S									T	T	G	G	G		B		G	G	G					S	S								T	T		T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	G	I	A	G	S	E	L	H	I	F	R	D	C	G	H	W	A	Q	W	E	H	A	D	A	F	N	Q	L	V	L	N	F	L	A	R
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		A	S	R	.	.	L	R	A	P	I	R	V	L	P	E	A	G	H	Y	L	W	I	D	A	P	E	A	F	E	E	A	F	K	E	A	L	A	A
Template Known Secondary structure					.	.		T							T	T			S	S																			T
Template Predicted Secondary structure					.	.
Template SS confidence
		240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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