Job Description P77044 Confidence 99.41% Date Thu Jan 5 12:25:30 GMT 2012 Rank 163 Aligned Residues 275 % Identity 13% Template c2veoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lipase a; PDBTitle: x-ray structure of candida antarctica lipase a in its2 closed state. Resolution 2.20 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																.	.	.						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	N	V	E	E	A	G	K	T	L	R	I	H	.	.	.	F	N	D	C	G	.	.	Q	G	D	E	T	V	V	L	L	H	G	S	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	W	A	N	F	S	R	N	I	D	P	L	V	E	A	G	Y	R	V	I
Query Conservation																.	.	.						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.						.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	T	T	N	T	Q	N	E	A	V	A	D	V	A	T	V	W	I	P	A	K	P	A	S	P	P	K	I	F	S	Y	Q	V	Y	E	D	A	T	A	L	D	C	A	P	S	Y	S	Y	L	T	G	L	D	Q	P	N	K	V	T	A	V	L	D	T	P	I	I	I	G	W	A	L	Q	Q	G	Y	Y	V	V
Template Known Secondary structure							T	T	S													S	S			S	S													S	S	G	G	G							B	S		S			T	T	G	G	G	G	T	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		L	L	D	C	P	G	W	G	K	S	D	S	V	V	N	S	G	S	R	.	S	D	L	N	A	R	I	L	K	S	V	V	D	Q	L	D	I	A	K	I	H	L	L	G	N	S	M	G	G	H	S	S	V	A	F	T	L	K	W	P	E	R	V	G	K	L	V	L	M	G	G	G	T	G	G	M	S	L	F	T
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		S	S	D	H	E	G	F	K	A	A	F	I	A	G	Y	E	E	G	M	A	I	L	D	G	I	R	A	L	K	N	Y	Q	N	L	P	S	D	S	K	V	A	L	E	G	Y	S	G	G	A	H	A	T	V	W	A	T	S	L	A	D	S	Y	A	P	E	L	N	I	V	G	A	S	H	G	G	T	P	V	S	A
Template Known Secondary structure					T	T	T	T	T	T		T	T																				T	T			T	T									T																		T	T	S									S				B
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160																					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Query Sequence		P	M	P	T	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	L	N	Q	L	Y	R	Q	P	T	I	E	N	L	K	L	M	M	D	I	F	V	F	D	T	S	D	L	T	D	A	L	F	E	A	R	L	N	N	M	L	S	R	R	D	.	.	.	.	.	H	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation
Template Sequence		K	D	T	F	T	F	L	N	G	G	P	F	A	G	F	A	L	A	G	V	S	G	L	S	L	A	H	P	D	M	E	S	F	I	E	A	R	L	N	A	K	G	Q	Q	T	L	K	Q	I	R	G	R	G	F	C	L	P	Q	V	V	L	T	Y	P	F	L	N	V	F	S	L	V	N	D	T	N	L	L	N	E
Template Known Secondary structure									T	T	S	T	T	T																							T	T	B												T	S	T	T											T	T			G	G	G	G	B	S		T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																								.	.	.	.												.	.
Query SS confidence																																																								.	.	.	.												.	.
Query Sequence		E	N	F	V	K	S	L	E	A	N	P	K	Q	F	P	D	F	G	P	R	L	A	E	I	K	A	Q	T	L	I	V	W	G	R	N	D	R	F	V	P	M	D	A	G	L	R	L	L	S	G	I	A	G	S	.	.	.	.	E	L	H	I	F	R	D	C	G	H	W	.	.	A	Q	W	E	H	A	D	A	F
Query Conservation																																																								.	.	.	.												.	.
Alig confidence																																																								.	.	.	.												.	.
Template Conservation
Template Sequence		A	P	I	A	G	I	L	K	Q	E	T	V	V	Q	A	E	A	S	Y	T	V	S	V	P	K	F	P	R	F	I	W	H	A	I	P	D	E	I	V	P	Y	Q	P	A	A	T	Y	V	K	E	Q	C	A	K	G	A	N	I	N	F	S	P	Y	P	I	A	E	H	L	T	A	E	I	F	G	L	V	P	S	L
Template Known Secondary structure		T	T								S	B			T	T	T		S	S							S								T	T		S	S	S															T	T									S	S										T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	L	V	L	N	F	L	A	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	F	I	K	Q	A	F	D	G	T	T
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions