Return to main results Retrieve Phyre Job Id

Job DescriptionP77044
Confidence99.41%DateThu Jan 5 12:25:30 GMT 2012
Rank164Aligned Residues189
% Identity16%Templatec2cbgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:fengycin synthetase; PDBTitle: crystal structure of the pmsf-inhibited thioesterase domain2 of the fengycin biosynthesis cluster
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  QGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLG
Query Conservation   
   





              
      
  

  
  
 
 
                                 
Alig confidence 

























....














............






















Template Conservation       
      

    
  

  
....     
      
  ............  
  
   
       
  
 
Template Sequence  QGGKNLFCFPPISGFGIYFKDLALQL. . . . NHKAAVYGFHFIEED. . . . . . . . . . . . SRIEQYVSRITEIQPEGPYVLLG
Template Known Secondary structure 

SS

TT

GGGGT....TTTS



ST............T

SS
Template Predicted Secondary structure 











....







............




Template SS confidence 















































































   1920.........30.........40.... .....50......... 60.........70.........80..
 
   118.120......... 130.........140.........150.........160.........170.........180.........190....
Predicted Secondary structure 





...
































Query SS confidence 











. . .
































































Query Sequence  NSMGGHSSVAFT. . . LKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALF
Query Conservation              ...                                                                 
Alig confidence 











...


















































..............
Template Conservation   
 

 

 
 
  
   
  
  





            
                       ..............
Template Sequence  YSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADLPEAVRETVMQKKRCYQEYWAQLINE. . . . . . . . . . . . . .
Template Known Secondary structure  TTT

S




S






T



..............
Template Predicted Secondary structure 



















..............
Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140........
 
   195....200.........210.........220.........230.........240. ........250.........260 .........270..
Predicted Secondary structure 












.








.






Query SS confidence 














































.


















.











Query Sequence  EARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWG. RNDRFVPMDAGLRLLSGIA. GSELHIFRDCGH
Query Conservation                                    
  
  
 


 
.  
                .      
   

Alig confidence  ...................................











.


















.








.

Template Conservation  ...................................  
   
  
                
            
 
. 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRIKSNIHFIEAGIQTETSGAMVLQKWQDAAEEGYAEYTGYG. AH
Template Known Secondary structure  ...................................S
BSS
S

SS

TTTGGGSSGGGBSS

SS.
G
Template Predicted Secondary structure  ...................................




















.

Template SS confidence 















































































   158.160.........170.........180.........190......... 200.
 
   273...... 280.........290..
Predicted Secondary structure 

..

Query SS confidence 






. .












Query Sequence  WAQWEHA. . DAFNQLVLNFLAR
Query Conservation      
 
..      
  

 
Alig confidence 






..












Template Conservation     
        
  
   
  
Template Sequence  KDMLEGEFAEKNANIILNILDK
Template Known Secondary structure  GGSSSTT
Template Predicted Secondary structure 



Template SS confidence 





















   202.......210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions