Job Description P77044 Confidence 39.02% Date Thu Jan 5 12:25:30 GMT 2012 Rank 279 Aligned Residues 90 % Identity 12% Template c1gxsC_ PDB info PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme Resolution 2.3 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	F	L	N	V	E	E	A	G	K	T	L	R	I	H	F	N	D	C	G	Q	G	.	.	.	.	.	.	D	E	T	V	V	L	L	H	G	S	G	P	G	A	T	G	W	A	N	F	S	R	N	I	D	P	L	V	E	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	V	I	L
Query Conservation																									.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	G	Y	V	T	I	D	D	N	.	N	G	R	A	L	Y	Y	W	F	Q	E	A	D	T	A	D	P	A	A	A	P	L	V	L	W	L	N	G	G	P	G	C	S	S	I	G	L	G	A	M	Q	E	L	G	A	F	R	V	H	T	N	G	E	S	L	L	L	N	E	Y	A	W	N	K	A	A	N	I	L	F
Template Known Secondary structure									T	T	.	T	T												S	S		G	G	G	S									T	T	T			T	T	T	T					T	S	S	S					T	T	S	S						T	T		G	G	G	T	S
Template Predicted Secondary structure											.
Template SS confidence
		26	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		76	.	.	.		80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure						.						.	.
Query SS confidence						.						.	.
Query Sequence		L	D	C	P	.	G	W	G	K	S	.	.	D	S	V	V	N	S	G	S	R	S	D	L	N	A	R	I	L	K	S	V	V	D	Q
Query Conservation						.						.	.
Alig confidence						.						.	.
Template Conservation
Template Sequence		A	E	S	P	A	G	V	G	F	S	Y	S	N	T	S	S	D	L	S	M	G	D	D	K	M	A	Q	D	T	Y	T	F	L	V	K
Template Known Secondary structure					S	T	T	S	T	T				S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions