 |
Job Description | P00959 | Confidence | 99.57% | Date | Thu Jan 5 10:57:21 GMT 2012 |
Rank | 56 | Aligned Residues | 94 |
% Identity | 28% | Template | d1jjcb3 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Myf domain
|
Resolution | 2.60 |
|
 |
  |   |
581 | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | |
|
|
|
620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | |
. | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | V | A | L | I | E | N | A | E | F | V | E | G | S | D | K | L | L | R | L | T | L | D | L | G | G | E | K | R | N | V | F | S | G | I | R | S | A | . |
. |
. |
. |
Y | P | D | P | Q | A | L | I | G | R | H | T | I | M | . |
V | A | N | L | A | P | R | K | M | R | F | G | I | S | E | G | M | V | M | A | A | G |
Query Conservation |   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
|
|   |
|   |   |   |
|   |
|
|
|
|
|   |   |   | . | . | . | . |
|   |   |   |
|   |
|   |
|
|   |
|   |   | . |
|   |
|
|
|
|   |
|   |   |
|   |   |
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   | . |
|
|
|   |   |   |   |
|
|   |
| . |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|   |   | . |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|   |   |
Template Sequence |   |
V | V | F | A | R | V | L | E | A | H | P | I | P | G | . |
T | R | L | K | R | L | V | L | D | A | G | . |
R | T | V | E | V | V | S | G | A | E | N | A | R | K | G | I | G | . |
V | A | L | A | L | P | G | T | E | L | P | G | L | G | Q | K | V | G | E | R | V | I | Q | G | V | R | S | F | G | M | A | L | S | P | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| T | T | . | S | S |
|  |  |  |  |  |  | S | S | . | S |  |  |  |  |  |  |
|
| T | T |
|
| T | T |
|  | . |  |  |  |  |
| T | T |
|
|
| T | T |
| S | S |
|
|
|  |  |  |  | T | T |  |  |  |  | S |  |  |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
  |   |
|
|
|
|
656 | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
P | G | G | K | D | I | F | L | L | S | P | D | A | G | A | K | P | G | H | Q | V | K |
Query Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
E | L | G | V | G | E | Y | G | G | G | L | L | E | F | P | E | D | A | L | P | P | G | T | P | L | S |
Template Known Secondary structure |   |
 |  | T | S |
| S |
|
| S | S |
|
|
| B |
| T | T | S | S |
| T | T |
| B | G | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|