Return to main results Retrieve Phyre Job Id

Job DescriptionP00959
Confidence99.57%DateThu Jan 5 10:57:21 GMT 2012
Rank56Aligned Residues94
% Identity28%Templated1jjcb3
SCOP infoOB-fold Nucleic acid-binding proteins Myf domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   581........590.........600.........610......... 620.........630... ......640.........650.....
Predicted Secondary structure 











....





.







Query SS confidence 






































. . . .













.





















Query Sequence  LRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSA. . . . YPDPQALIGRHTIM. VANLAPRKMRFGISEGMVMAAG
Query Conservation 



 
  

  
 



  
 

 
   
 




   ....
   
 
 

 
  .
 



 
  
  
 

 


 
Alig confidence 













.










.











....
.











.





















Template Conservation 






    

 .


    

 
.   





 
   
  .
  
  
  
      

  




 
 




  
Template Sequence  VVFARVLEAHPIPG. TRLKRLVLDAG. RTVEVVSGAENARKGIG. VALALPGTELPGLGQKVGERVIQGVRSFGMALSPR
Template Known Secondary structure 
TT.SS
SS.S

TT

TT
.
TT


TT
SS


TTS

Template Predicted Secondary structure 


.




.










.















Template SS confidence 















































































   45....50........ .60......... 70.........80...... ...90.........100.........110.........120.
 
   656...660.........670.......
Predicted Secondary structure  ....















Query SS confidence  . . . .





















Query Sequence  . . . . PGGKDIFLLSPDAGAKPGHQVK
Query Conservation  ....                 
  
 
Alig confidence  ....





















Template Conservation 



     


 

      
    
Template Sequence  ELGVGEYGGGLLEFPEDALPPGTPLS
Template Known Secondary structure  TS
S

SS


B
TTSS
TT
BGG
Template Predicted Secondary structure 

















Template SS confidence 

























   122.......130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions