Job Description P00959 Confidence 99.68% Date Thu Jan 5 10:57:21 GMT 2012 Rank 52 Aligned Residues 196 % Identity 17% Template d1ivsa2 SCOP info Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Resolution 2.90

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		V	N	K	V	V	N	L	A	S	R	N	A	G	F	I	N	K	R	F	D	G	V	L	A	S	E	L	A	D	P	Q	L	Y	K	T	F	T	D	A	A	E	V	I	G	E	A	W	E	S	R	E	F	G	K	A	V	R	E	I	M	A	L	A	.	.	D	L	A	N	R	Y	V	D	E	Q	A	P	W	V	V
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		A	N	K	L	Y	N	A	A	R	F	V	L	L	S	R	E	G	F	Q	A	K	E	D	T	P	T	L	A	D	R	F	M	R	S	R	L	S	R	G	V	E	E	I	T	A	L	Y	E	A	L	D	L	A	Q	A	A	R	E	V	Y	E	L	V	W	S	E	F	C	D	W	Y	L	E	A	A	K	P	A	L	K
Template Known Secondary structure																S	S	S					B																											T	T																T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	E	G	R	D	A	D	L	Q	A	I	C	S	M	G	I	N	L	F	R	V	L	M	T	Y	L	K	P	V	L	P	K	L	T	E	R	A	E	A	F	L	N	T	E	L	T	W	D	G	I	Q	Q	P	L	L	G	H	K	V	N	P	F	K	A	L	Y	N	R	I	D	M	R	Q	V	E	A	L	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Sequence		A	G	N	.	.	.	.	.	.	.	A	H	T	L	R	T	L	E	E	V	L	A	V	L	L	K	L	L	H	P	M	M	P	F	L	T	S	E	L	Y	Q	A	L	T	G	K	E	E	L	A	L	E	A	W	P	E	P	G	G	.	.	.	.	.	R	D	E	E	A	E	R	A	F	E	A	L	K	Q	A	V
Template Known Secondary structure		T	T	B	.	.	.	.	.	.	.																			T	T	T	S															S		G	G	G	S								.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.																																																		.	.	.	.	.
Template SS confidence
		659	660	.								.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710						.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	K	E	E	V	K	A	A	A	A	P	V	T	G	P	L	A	D	D	P	I	Q	E	T	I	T	F	D	D	F	A	K	V	D	L	R	V	A	L	I	E	N	A	E	F	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	V	R	A	L	K	A	E	A	G	L	P	P	A	Q	E	V	R	V	Y	L	E	G	E	T	A	P	V	E	E	N	L	E	V	F	R	F	L	S	R	A	D	L	L	P	E	R	P	A
Template Known Secondary structure												T			T	T										S							T														S	S			S
Template Predicted Secondary structure
Template SS confidence
		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions