Job Description P00959 Confidence 97.18% Date Thu Jan 5 10:57:21 GMT 2012 Rank 78 Aligned Residues 94 % Identity 14% Template c3jxeB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of pyrococcus horikoshii tryptophanyl-trna2 synthetase in complex with trpamp Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	L	V	T	C	A	L	P	Y	A	N	G	S	I	H	L	G	H	M	L	E	H	I	Q	A	D	V	W	V	R	Y	Q	R	M	R	G	H	E	V	N	F	I	C	A	D	D	A	H	G	T	P	I	M	L	K	A	Q	Q	L	G	I	T	P	E	Q	M	I	G	E	M	S	Q	E	H	Q	T	D	F
Query Conservation
Alig confidence											.											.	.	.																										.	.	.	.	.	.															.
Template Conservation											.											.	.	.																										.	.	.	.	.	.															.
Template Sequence		R	G	F	F	L	Y	T	G	R	.	G	P	S	G	P	M	H	I	G	H	.	.	.	I	I	P	F	F	A	T	K	W	L	Q	E	K	F	G	V	N	L	Y	I	Q	I	T	D	D	.	.	.	.	.	.	E	K	F	L	F	K	E	N	L	T	F	D	D	T	.	K	R	W	A	Y	D	N	I	L	D	I
Template Known Secondary structure											.			S	S			B				.	.	.																										.	.	.	.	.	.							S	S							.
Template Predicted Secondary structure											.											.	.	.																										.	.	.	.	.	.															.
Template SS confidence
		72	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140
		86	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	G	F	N	I	S	Y	D	N	.	.	.	Y	H	S	T	H	S	E	E	N	R	Q	L	S	E	L	I
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		I	A	V	G	F	D	P	D	K	T	F	I	F	Q	N	S	E	F	T	K	I	Y	E	M	A	I	P	I
Template Known Secondary structure			T	T				T	T	S						T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions