Job Description P00959 Confidence 99.56% Date Thu Jan 5 10:57:21 GMT 2012 Rank 57 Aligned Residues 99 % Identity 19% Template c3bu2B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:putative trna-binding protein; PDBTitle: crystal structure of a trna-binding protein from2 staphylococcus saprophyticus subsp. saprophyticus.3 northeast structural genomics consortium target syr77 Resolution 2.70 Å

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		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.										.	.	.	.	640
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.
Query Sequence		T	I	T	F	D	D	F	A	K	V	D	L	R	V	A	L	I	E	N	A	E	F	V	E	G	S	D	K	L	L	R	L	T	L	D	L	G	G	E	K	R	N	V	F	S	G	I	R	S	A	Y	P	D	P	Q	A	L	I	G	R	H	T	I	M	V	A	.	.	.	.	.	.	.	.	.	N	L	A	P	R
Query Conservation																																																																				.	.	.	.	.	.	.	.	.
Alig confidence																																																					.		.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																					.		.	.	.	.	.
Template Sequence		T	Y	K	L	D	A	D	F	T	P	K	F	V	V	G	Y	V	E	T	K	D	K	H	P	D	A	D	K	L	S	V	L	S	V	D	V	A	T	E	K	L	Q	I	V	C	G	A	P	N	V	E	.	A	.	.	.	.	.	G	Q	K	V	V	V	A	K	V	G	A	V	X	P	S	G	X	V	I	K	D	A
Template Known Secondary structure										S		S													T	T	T	S	S									S	S										T	T			.	T	.	.	.	.	.	T								T	T		B		T	T	S		B
Template Predicted Secondary structure																																																					.		.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		641	.	.	.	.	.	.	.	.	650	.	.	.	.						.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		K	M	R	F	G	I	S	E	G	M	V	M	A	A	.	.	.	.	.	G	P	G	G	K	D	I	F	L	L	S	P	D	A	G	A	K	P	G	H
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		E	L	R	G	V	A	S	S	G	X	I	C	S	X	K	E	L	G	L	P	N	A	P	Q	E	K	G	I	X	V	L	S	D	D	Y	T	V	G	Q
Template Known Secondary structure				T	T					S					T	T	T	T	T		S	S			S			S						T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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