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Job DescriptionP00959
Confidence98.99%DateThu Jan 5 10:57:21 GMT 2012
Rank64Aligned Residues285
% Identity16%Templatec3aiiA_
PDB info PDB header:ligaseChain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: archaeal non-discriminating glutamyl-trna synthetase from2 methanothermobacter thermautotrophicus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQ
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Template Sequence  AGVKGEVVLRFAPNPSGPLHIGHARAAILNHEYARKY. . DGRLILRIEDTD. . . . . . . . . . . . . . . . PRRVDPEAYDMIP
Template Known Secondary structure  SS

S




SSSS
BT..T




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TT
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   91........100.........110.........120....... ..130......... 140.........150..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  TDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVC
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Template Sequence  ADLEWLGVEWDETVIQS. . DRMETYYEYTEKLIERGGAYV. . . . . . . CTCRPEEFRELKNRGEACHCR. . . . . . . . . . . .
Template Known Secondary structure  T


SGG..GGTTS.......
S
TT


GGG............
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   153......160......... 170.........180.........190 .........200.........210.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  GATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLGFRENLQRWREMFEMKEGSAVVRVKTDLNHP
Template Known Secondary structure  ...............................................G

GGGS
TTS



TT
S
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   212.......220.........230.........240....
 
   243......250.........260.........270.........280.........290......... 300.........310.........320.
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Query Sequence  IPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIV. YFHSLFWPAMLEGSNFRKPSNL
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Template Sequence  NPAIRDWVSMRIVEAEHPRTGTRYRVYPMMNFSVAVDD. . . . . . . . . . . HLLGVTHVLRANREKQEYLYRHLGWEPPEF.
Template Known Secondary structure  SGGGTT


S
BTTTBTS


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   245....250.........260.........270.........280.. .......290.........300.........310..
 
   322.......330.........340.. .......350 .........360.........370.........380......
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Query Sequence  FVHGYVTVNGAKMSKSRGTFI. . . . . . . . KASTWLNH. FDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADI
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Template Sequence  IHYGRLKTSGAREGILRGEYSGWDDPRLGTLRAIARRGIRPEAIRKLMVEIGV. KIADSTMSWKKIYGLNRSIL
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B

SS

STT
TTS
BTT

TT.
SS
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   318.320.........330.........340.........350.........360.........370 .........380.........390
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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