Job Description P00959 Confidence 95.19% Date Thu Jan 5 10:57:21 GMT 2012 Rank 104 Aligned Residues 159 % Identity 13% Template c2yy5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from mycoplasma2 pneumoniae Resolution 2.55 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330												.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		L	Y	H	F	I	G	K	D	I	V	Y	F	H	S	L	F	W	P	A	M	L	E	G	S	N	F	R	K	P	S	N	L	F	V	H	G	Y	V	T	V	N	.	.	.	.	.	.	.	.	.	.	.	G	A	K	M	S	K	S	R	G	T	.	.	.	F	I	K	A	S	T	W	L	N	H	F	D	A	D	S
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence											.																																.	.	.	.	.	.	.	.	.	.	.											.	.	.							.	.	.	.	.
Template Conservation											.																																																														.	.	.	.	.
Template Sequence		D	I	V	P	V	G	N	D	Q	.	K	Q	H	L	E	L	T	R	D	L	A	Q	R	I	Q	K	K	F	K	L	K	L	R	L	P	Q	F	V	Q	N	K	D	T	N	R	I	M	D	L	F	D	P	T	K	K	M	S	K	S	S	K	N	Q	N	G	V	I	Y	L	D	D	.	.	.	.	.	P	K	E	V
Template Known Secondary structure		S						G	G	G	.																															T	T	T	T	T		B		S	S		T	T	S	B			T	T		S		G	G	G			B	T	T		.	.	.	.	.
Template Predicted Secondary structure											.																																																														.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.							.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		L	R	Y	Y	Y	T	A	K	L	S	S	R	I	D	D	I	D	L	N	.	.	.	.	.	.	L	E	D	F	V	Q	R	V	N	A	D	I	V	N	K	V	V	N	L	A	S	R	N	A	G	F	I	N	K	R	F	D	G	V	L	A	S	E	L	A	D	P	Q	L	Y	K	T	F	T	D	A	A	E	V	I
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	K	K	I	R	Q	A	T	T	D	S	F	N	K	I	R	F	A	S	K	T	Q	P	G	V	T	N	M	L	T	I	L	K	A	L	L	K	E	P	V	N	Q	S	L	T	N	Q	L	G	N	D	L	E	A	Y	F	S	T	K	S	Y	L	D	L	K	N	A	L	T	E	A	T	V	N	L	L	V	N	I
Template Known Secondary structure													S	S				S			T	T	T															T	T	S	G	G	G									S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	W	E	S	R	E	F	G	K	A	V	R	E	I	M	A	L	A	D	L	A	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	K	R	E	Q	I	S	R	E	Q	V	F	N	C	L	Q	A	G	K	N	Q	A	Q	A
Template Known Secondary structure							T	S
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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