Job Description P00959 Confidence 99.78% Date Thu Jan 5 10:57:21 GMT 2012 Rank 48 Aligned Residues 292 % Identity 15% Template c2ja2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase Resolution 1.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	Q	V	A	K	K	I	L	V	T	C	A	L	P	Y	A	N	G	S	I	H	L	G	H	M	L	E	H	I	Q	A	D	V	W	V	R	Y	Q	R	M	R	G	H	E	V	N	F	I	C	A	D	D	A	H	G	T	P	I	M	L	K	A	Q	Q	L	G	I	T	P	E	Q	M	I	G	E	M	S	Q	E
Query Conservation
Alig confidence				.												.																							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.												.																							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	.	A	T	E	T	V	R	V	R	F	C	P	.	S	P	T	G	T	P	H	V	G	L	V	R	T	A	L	F	N	W	A	Y	A	R	.	.	.	.	.	H	T	G	G	T	F	V	F	R	I	E	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	R	D	S	E	E	S	Y	L	A
Template Known Secondary structure				.	S											.		S	S	S	S		B																.	.	.	.	.			T							B					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure				.												.																							.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.														50	.	.	.	.	.	.	.	.	.	60
		81	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		H	Q	T	D	F	A	G	F	N	I	S	Y	D	.	.	.	.	.	.	.	N	Y	H	S	T	H	S	E	E	N	R	Q	L	S	E	L	I	Y	S	R	L	K	E	N	G	F	I	K	N	R	T	I	S	Q	L	Y	D	P	E	K	G	M	F	L	P	D	R	F	V	K	G	T	C	P	K	C	K	S	P	D
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		L	L	D	A	L	R	W	L	G	L	D	W	D	E	G	P	E	V	G	G	P	Y	G	P	Y	R	Q	S	Q	R	A	E	I	Y	R	D	V	L	A	R	L	L	A	A	G	E	A	Y	H	.	.	.	.	.	.	.	A	F	S	T	P	E	E	V	E	A	R	H	V	A	A	G	R	N	P	K	L	G	Y	D
Template Known Secondary structure										T				S	B	B	T	T	T	B		T	T				B	G	G	G															T	T	S				.	.	.	.	.	.	.															T	T			T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		Q	Y	G	D	N	C	E	V	C	G	A	T	Y	S	P	T	E	L	I	E	P	.	.	K	S	V	V	S	G	A	T	P	V	M	R	D	S	E	H	F	F	F	D	L	P	S	F	S	E	M	L	Q	A	W	T	R	S	G	A	L	Q	E	Q	V	A	N	K	M	Q	E	W	F	E	S	G	L	Q	Q	W	D
Query Conservation																							.	.
Alig confidence																							.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	D	R	H	L	T	D	A	Q	R	A	A	Y	L	A	E	G	R	Q	P	V	V	R	L	R	M	P	D	D	D	L	A	W	N	D	L	V	R	G	P	V	T	F	A	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	D	F	A
Template Known Secondary structure			G	G	G	G												T	T											S	S							T	T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				B
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																												.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		I	S	R	D	A	P	Y	F	G	F	E	I	P	N	A	P	G	K	Y	F	Y	V	W	L	D	A	P	I	G	Y	M	G	S	F	K	N	L	C	D	K	R	G	D	S	V	S	F	D	E	Y	W	K	K	D	S	T	A	E	L	Y	H	F	I	G	K	D	I	V	.	.	.	.	Y	F	H	S	L	F	W	P
Query Conservation																																																																						.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	R	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	L	Y	T	L	V	N	P	C	D	D	A	L	M	K	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	L	R	G	E	D	L	L	P	S	T	P	R	Q	L	A	L	H	Q	A
Template Known Secondary structure		S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B													T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.																				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		A	M	L	E	G	S	N	F	R	K	P	S	N	L	F	V	H	G	Y	V	T	V	N	G	A	K	M	S	K	S	R	G	T	F	I	K	A	S	T	W	L	N	H	F	D	A	D	S	L	R	Y	Y	Y	T	A	K	L	.	S	S	R	I	D	D	I	D	L	N	L	E	D	F	V	Q	R
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		L	I	R	I	G	V	A	E	R	I	P	K	F	A	H	L	P	T	V	L	G	E	G	T	K	K	L	S	K	R	D	P	Q	S	N	L	F	A	H	R	D	R	G	F	I	P	E	G	L	L	N	Y	L	A	L	L	G	W	S	I	A	D	D	H	D	L	F	G	L	D	E	M	V	A	A
Template Known Secondary structure					T	T	S																S	S	S	S	B			T	T	S	G	G	G	B								T												T	S	S			S		S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions