Job Description P00959 Confidence 99.40% Date Thu Jan 5 10:57:21 GMT 2012 Rank 60 Aligned Residues 292 % Identity 13% Template c2hz7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutaminyl-trna synthetase; PDBTitle: crystal structure of the glutaminyl-trna synthetase from2 deinococcus radiodurans Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	C	A	L	P	Y	A	N	G	S	I	H	L	G	H	M	L	E	H	I	Q	A	D	V	W	V	R	Y	Q	R	M	R	G	H	E	V	N	F	I	C	A	D	D	A	H	G	T	P	I	M	L	K	A	Q	Q	L	G	I	T	P	E	Q	M	I	G	E	M	S	Q	E	H	Q	T	D	F	A	G	F
Query Conservation
Alig confidence																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	T	R	F	P	P	D	P	S	G	Y	A	H	L	G	H	V	F	A	S	L	L	D	F	N	T	A	R	.	.	Q	Y	G	G	Q	F	N	L	R	M	D	D	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	L	A	R	Q	E	Y	V	D	S	I	A	D	D	L	K	W	L
Template Known Secondary structure										S	S	S			B																.	.		T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		89	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		N	I	S	Y	D	.	N	Y	H	S	T	H	S	E	E	N	R	Q	L	S	E	L	I	Y	S	R	L	K	E	N	G	F	I	K	N	R	T	I	S	Q	L	Y	D	P	E	K	G	M	F	L	P	D	R	F	V	K	G	T	C	P	K	C	K	S	P	D	Q	Y	G	D	N	C	E	V	C	G	A	T	Y	S
Query Conservation							.
Alig confidence							.							.	.																						.	.	.	.	.	.	.																																					.	.
Template Conservation														.	.																						.	.	.	.	.	.	.																																					.	.
Template Sequence		G	L	D	W	G	E	H	F	Y	Y	A	S	.	.	D	Y	F	D	R	Y	Y	A	Y	A	E	Q	L	I	R	Q	G	D	A	Y	V	.	.	.	.	.	.	.	E	S	V	S	P	E	E	L	S	R	L	R	G	N	A	T	T	P	G	T	P	S	P	Y	R	D	R	S	V	E	E	N	L	D	L	L	.	.
Template Known Secondary structure		T				T	T					G	G	.	.	G	G														T	T	S				.	.	.	.	.	.	.			S											B	T	T	B						T	T	T	T											.	.
Template Predicted Secondary structure														.	.																						.	.	.	.	.	.	.																																					.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	E	L	I	E	P	K	S	V	V	S	G	A	T	P	V	M	R	D	S	E	H	F	F	F	D	L	P	S	F	S	E	M	L	Q	A	W	T	R	S	G	A	L	Q	E	Q	V	A	N	K	M	Q	E	W	F	E	S	G	L	Q	Q	W	D	I	S	R	D	A	P	Y	F	G	F	E	I	P	N	A	P
Query Conservation
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		.	R	R	M	K	A	G	E	F	A	D	G	E	H	V	L	R	A	K	I	D	L	T	A	P	N	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	P	V	L	Y	R	I	V	N	.	.	.	.	.	.	.	K	P	H
Template Known Secondary structure		.					T	T		S		T	T	S									T	T		S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S									.	.	.	.	.	.	.			B
Template Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																																.	.	.	.	230	.	.	.	.	.	.								.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	F	Y	V	W	L	D	A	P	I	G	Y	M	G	S	F	K	N	L	C	D	K	R	G	D	S	V	S	F	D	E	Y	W	K	K	D	S	T	A	E	L	Y	H	F	I	G	K	D	I	V	Y	F	H	S	L	F	W	P	A	M	L	E	G	S	N	F	R	K	P	S	N	L	F	V	H	G	Y	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	T	S	D	E	W	H	I	Y	P	A	Y	D	F	E	H	P	L	Q	D	A	I	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	S	M	C	S	L	E	F	V	D	N	R	A	I	Y	D	W	L	M	E	K	L	N	F	D	P	R	P	H	Q	Y	E	F	G	R	R
Template Known Secondary structure		T	T	T	B	T	S		S																	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						G	G	G	T	T	T											T	T		S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340																.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		T	V	N	G	A	K	M	S	K	S	R	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	K	A	S	T	W	L	N	H	.	F	D	A	D	S	L	R	Y	Y	Y	T	A	K	L	S	S	R	I	D	D	I	D	L	N	L	E	D	F	V	Q	R	V	N	A	D	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Template Conservation																																																								.
Template Sequence		G	L	E	Y	T	I	T	S	K	R	K	L	R	E	L	V	Q	A	G	R	V	S	G	W	D	D	P	R	M	P	T	L	R	A	Q	R	R	L	G	V	T	P	E	A	V	R	A	F	A	A	Q	I	G	V	.	S	R	T	N	R	T	V	D	I	A	V	Y	E	N	A	V	R	D	D	L
Template Known Secondary structure				T	T														T	T	S	S	S	S	T	T		T	T	S	S	B								T													S			.		S	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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