Job Description P00959 Confidence 95.87% Date Thu Jan 5 10:57:21 GMT 2012 Rank 95 Aligned Residues 159 % Identity 14% Template c1yi8C_ PDB info PDB header:ligase Chain: C: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl trrna synthetase ii from deinococcus2 radiodurans in complex with l-trp Resolution 2.10 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.							.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																											.	.	.	.	.	.												.	.								.
Query SS confidence																											.	.	.	.	.	.												.	.								.
Query Sequence		L	Y	H	F	I	G	K	D	I	V	Y	F	H	S	L	F	W	P	A	M	L	E	G	S	N	.	.	.	.	.	.	F	R	K	P	S	N	L	F	V	H	G	.	.	Y	V	T	V	N	G	A	.	K	M	S	K	S	R	G	T	F	I	K	A	S	T	W	L	N	H	F	D	A	D	S	L	R	Y	Y	Y
Query Conservation																											.	.	.	.	.	.												.	.								.
Alig confidence													.														.	.	.	.	.	.												.	.								.															.	.	.	.	.
Template Conservation													.																																																							.	.	.	.	.
Template Sequence		T	L	V	P	V	G	D	D	Q	L	P	.	M	L	E	Q	T	R	E	I	V	R	R	F	N	A	L	Y	A	P	V	L	A	E	P	Q	A	Q	L	S	R	V	P	R	L	P	G	L	D	G	Q	A	K	M	S	K	S	L	G	N	A	I	A	L	G	D	.	.	.	.	.	S	A	D	E	V	A	R	K	V
Template Known Secondary structure		S						T	T	T			.																S		S		S										S	S					T	T	S		S				T	T	T	T				B	T	T		.	.	.	.	.
Template Predicted Secondary structure													.																																																							.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		T	A	K	L	S	S	R	I	D	D	I	D	L	N	L	E	D	F	V	Q	R	V	N	A	D	I	V	N	K	V	V	N	L	A	S	R	N	A	G	F	I	N	K	R	F	D	G	V	L	A	S	E	L	A	D	P	Q	L	Y	K	T	F	T	D	A	A	E	V	I	G	E	A	W	E	S	R	.	.	E	F
Query Conservation																																																																														.	.
Alig confidence																																																																														.	.
Template Conservation
Template Sequence		M	G	M	Y	T	D	P	G	H	L	R	A	S	D	P	G	R	V	E	G	N	P	V	F	T	F	L	D	A	F	D	P	D	P	A	R	V	Q	A	L	K	D	Q	Y	R	A	G	G	L	G	D	V	K	V	K	K	H	L	I	D	V	L	N	G	V	L	A	P	I	R	T	R	R	A	E	Y	E	R	D	P
Template Known Secondary structure			T					T	T			S	T	T	S					T	T												S															S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	V	R	E	I	M	A	L	A	D	L	A	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	L	R	F	V	T	E	G	T	A	R	G	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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