Job Description P00959 Confidence 99.82% Date Thu Jan 5 10:57:21 GMT 2012 Rank 45 Aligned Residues 275 % Identity 18% Template c1g59A_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: glutamyl-trna synthetase complexed with trna(glu). Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	T	C	A	L	P	Y	A	N	G	S	I	H	L	G	H	M	L	E	H	I	Q	A	D	V	W	V	R	Y	Q	R	M	R	G	H	E	V	N	F	I	C	A	D	D	A	H	G	T	P	I	M	L	K	A	Q	Q	L	G	I	T	P	E	Q	M	I	G	E	M	S	Q	E	H	Q	T	D	F	A	G
Query Conservation
Alig confidence																																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	V	T	R	I	A	P	S	P	T	G	D	P	H	V	G	T	A	Y	I	A	L	F	N	Y	A	W	A	R	.	.	.	.	.	R	N	G	G	R	F	I	V	R	I	E	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R	Y	V	P	G	A	E	E	R	I	L	A	A	L	K	W
Template Known Secondary structure												S	S	S		B																.	.	.	.	.		T	T							B					.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T
Template Predicted Secondary structure																																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		88	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		F	N	I	S	Y	D	.	.	.	.	.	.	.	N	Y	H	S	T	H	S	E	E	N	R	Q	L	S	E	L	I	Y	S	R	L	K	E	N	G	F	I	K	N	R	T	I	S	Q	L	Y	D	P	E	K	G	M	F	L	P	D	R	F	V	K	G	T	C	P	K	C	K	S	P	D	Q	Y	G	D	N	C	E
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	L	S	Y	D	E	G	P	D	V	A	A	P	T	G	P	Y	R	Q	S	E	R	L	P	L	Y	Q	K	Y	A	E	E	L	L	K	R	G	W	A	Y	R	A	F	E	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T				S	B		S	S	S			S	S	S		S	B	G	G	G	G													T	T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	G	A	T	Y	S	P	T	E	L	I	E	P	K	S	V	V	S	G	A	T	P	V	M	R	D	S	E	H	F	F	F	D	L	P	S	F	S	E	M	L	Q	A	W	T	R	S	G	A	L	Q	E	Q	V	A	N	K	M	Q	E	W	F	E	S	G	L	Q	Q	W	D	I	S	R	D	A	P	Y	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	E	Q	I	R	K	E	K	G	G	Y	D	G	R	A	R	N	I	P	P	E	E	A	E	E	R	A	R	R	G	E	P	H	V	I	R	L	K	V	P	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S				G	G	G	G	S											T	T											.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template SS confidence
																																					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																.	.	.	.	.	.												.	.	.
Query SS confidence																																.	.	.	.	.	.												.	.	.
Query Sequence		F	E	I	P	N	A	P	G	K	Y	F	Y	V	W	L	D	A	P	I	G	Y	M	G	S	F	K	N	L	C	D	.	.	.	.	.	.	K	R	G	D	S	V	S	F	D	E	Y	.	.	.	W	K	K	D	S	T	A	E	L	Y	H	F	I	G	K	D	I	V	Y	F	H	S	L	F	W	P	A	M	L	E
Query Conservation																																.	.	.	.	.	.												.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.	.	.	.												.	.	.												.	.													.
Template Conservation		.	.	.	.	.	.	.																																																							.	.													.
Template Sequence		.	.	.	.	.	.	.	R	P	G	T	T	E	V	K	D	E	L	R	G	V	V	V	Y	D	N	Q	E	I	P	D	V	V	L	L	K	S	D	G	Y	P	T	Y	H	L	A	N	V	V	D	D	H	L	M	G	V	T	D	V	I	R	.	.	A	E	E	W	L	V	S	T	P	I	H	V	.	L	L	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	S	S								T	T	T							G	G	G	S								T	T	S		B													T	T							.	.		G	G	G	T	T	T						.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																							.	.													.
Template SS confidence
									152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	S	N	F	R	K	P	S	N	L	F	V	H	G	Y	V	T	V	N	G	A	K	M	S	K	S	R	G	T	F	I	K	A	S	T	W	L	N	H	F	D	A	D	S	L	R	Y	Y	Y	T	A	K	L	S	S	R	I	D	D	.	I	D	L	N	L	E	D	F	V	Q	R
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		A	F	G	W	E	A	P	R	F	Y	H	M	P	L	L	R	N	P	D	K	T	K	I	S	K	R	K	S	H	T	S	L	D	W	Y	K	A	E	G	F	L	P	E	A	L	R	N	Y	L	C	L	M	G	F	S	M	P	D	G	R	E	I	F	T	L	E	E	F	I	Q	A
Template Known Secondary structure			T	T													B		T	T	S	S	B			T	T	T	S			B							T	T													T	T	B			T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions