Job Description P21499 Confidence 100.00% Date Thu Jan 5 11:38:21 GMT 2012 Rank 7 Aligned Residues 401 % Identity 27% Template d2vnud4 SCOP info OB-fold Nucleic acid-binding proteins RNB domain-like Resolution 2.30

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	D	I	A	L	R	T	H	E	I	P	Y	I	W	P	Q	A	V	E	Q	Q	V	A	G	L	K	E	E	V	P	E	E	A	K	A	G	R	V	D	L	R	D	L	P	L	V	T	I	D	G	E	D	A	R	D	F	D	D	A	V	Y	C	E	K	K	R	G	G	G	W	R	L	W	V	A	I	A	D	V
Query Conservation
Alig confidence																												.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		K	V	L	E	C	L	P	A	E	G	H	D	W	K	A	P	T	K	L	D	D	P	E	A	V	S	.	.	.	.	K	D	P	L	L	T	K	R	K	D	L	R	D	K	L	I	C	S	I	D	P	P	G	C	V	D	I	N	D	A	L	H	A	K	K	L	P	N	G	N	W	E	V	G	V	H	I	A	D	V
Template Known Secondary structure					T	T	S		T	T	G	G	G					S	S	T	T							.	.	.	.			G	G	G	G	G	S				T	T	S							S	S	S														T	T	S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.					.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	Y	V	R	P	S	T	P	L	D	R	E	A	R	N	R	G	T	S	V	Y	F	P	S	Q	V	I	P	M	L	P	E	V	L	S	N	G	L	C	S	L	N	P	Q	V	D	R	L	C	M	V	C	E	M	T	V	S	S	K	G	R	L	T	G	Y	K	F	Y	E	A	V	M	S	S	H	A	R	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	F	V	K	P	G	T	A	L	D	A	E	G	A	A	R	G	T	S	V	Y	L	V	D	K	R	I	D	X	L	P	X	L	L	G	T	D	L	C	S	L	K	P	Y	V	D	R	F	A	F	S	V	I	W	E	L	D	D	S	A	N	I	V	N	V	N	F	X	K	S	V	I	R	S	R	E	A	F	S
Template Known Secondary structure					S		T	T	S											B					S	S					S	S						T	T	T	S	S			B	T	S													T	T															B	S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Y	T	K	V	W	H	I	L	Q	G	D	Q	D	L	R	E	Q	Y	A	P	L	V	K	H	L	E	E	L	H	N	L	Y	K	V	L	D	K	A	R	E	E	R	G	G	I	S	F	E	S	E	E	A	K	F	I	F	N	.	A	E	R	R	I	E	R	I	E	Q	T	Q	R	N	D	A	H	K	L	I	E	E
Query Conservation																																																											.
Alig confidence																.	.	.	.																																								.
Template Conservation																.	.	.	.
Template Sequence		Y	E	Q	A	Q	L	R	I	D	D	K	T	Q	N	.	.	.	.	D	E	L	T	X	G	X	R	A	L	L	K	L	S	V	K	L	K	Q	K	R	L	E	A	G	A	L	N	L	A	S	P	E	V	K	V	H	X	D	S	E	T	S	D	P	N	E	V	E	I	K	K	L	L	A	T	N	S	L	V	E	E
Template Known Secondary structure												T	T			.	.	.	.																								T	T															S	S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.					.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.				.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																		.																																																		.	.	.
Query SS confidence																		.																																																		.	.	.
Query Sequence		C	M	I	L	A	N	I	S	A	A	R	F	V	E	K	A	.	K	E	P	A	L	F	R	I	H	D	K	P	S	T	E	A	I	T	S	F	R	S	V	L	A	E	L	G	L	E	L	P	G	G	N	K	P	E	P	R	D	Y	A	E	L	L	E	S	V	.	.	.	A	D	R	P	D	A	E	M	L	Q	T
Query Conservation																		.																																																		.	.	.
Alig confidence																		.																																	.	.																.	.	.
Template Conservation																																																			.	.
Template Sequence		F	X	L	L	A	N	I	S	V	A	R	K	I	Y	D	A	F	P	Q	T	A	X	L	R	R	H	A	A	P	P	S	T	N	F	E	I	L	N	E	X	L	N	T	R	K	N	X	S	I	.	.	S	L	E	S	S	K	A	L	A	D	S	L	D	R	C	V	D	P	E	D	P	Y	F	N	T	L	V	R	I
Template Known Secondary structure																			T	T	T						B					G	G	G	G												S				.	.			S											T			B	T	T	B	T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.			.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.							.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		M	L	L	R	S	M	K	Q	A	I	Y	.	.	.	.	.	.	D	P	E	N	R	G	H	F	G	L	A	L	Q	S	Y	A	H	F	T	S	P	I	R	R	Y	P	D	L	T	L	H	R	A	I	K	Y	L	L	A	K	E	Q	G	H	Q	G	N	T	T	E	T	G	G	Y	H	Y	S	M	E	E	M	L	Q
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		X	S	T	R	C	X	X	A	A	Q	Y	F	Y	S	G	A	Y	S	Y	P	D	F	R	H	Y	G	L	A	V	D	I	Y	T	H	F	T	S	P	I	R	R	Y	C	D	V	V	A	H	R	Q	L	A	G	A	I	G	Y	E	.	.	.	.	.	.	.	.	P	L	S	L	T	H	R	D	K	N	K	X	D	X
Template Known Secondary structure					T	T	S								G	G	G	S		G	G	G	G		B	T	T	T	T	B	S						S		T	T	T	B														T	T	S	S	.	.	.	.	.	.	.	.				G	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		808	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.									.	.	.	.	870	.	.	.	.	.	.	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	H	C	S	M	A	E	R	R	A	D	E	A	T	R	D	V	A	D	W	L	K	C	D	F	M	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	R	N	I	N	R	K	H	R	N	A	Q	F	A	G	R	A	S	I	E	Y	Y	V	G	Q	V	X	R	N
Template Known Secondary structure																															T
Template Predicted Secondary structure
Template SS confidence
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.