Job Description P21499 Confidence 100.00% Date Thu Jan 5 11:38:21 GMT 2012 Rank 5 Aligned Residues 395 % Identity 26% Template d2r7da2 SCOP info OB-fold Nucleic acid-binding proteins RNB domain-like Resolution 1.80

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																	.	.	.																											.
Query SS confidence																																																	.	.	.																											.
Query Sequence		M	G	A	R	M	G	F	V	V	V	V	E	L	T	Q	R	P	T	R	R	T	K	A	V	G	K	I	V	E	V	L	G	D	N	M	G	T	G	M	A	V	D	I	A	L	R	T	.	.	.	H	E	I	P	Y	I	W	P	Q	A	V	E	Q	Q	V	A	G	L	K	E	E	V	P	E	E	A	.	K	A	G
Query Conservation																																																	.	.	.																											.
Alig confidence																			.	.	.																												.	.	.																											.
Template Conservation																			.	.	.
Template Sequence		P	E	L	T	P	A	Q	R	T	E	V	E	L	L	A	R	G	.	.	.	R	A	D	K	S	R	V	L	R	D	L	K	L	P	E	T	P	E	A	A	H	A	L	L	L	R	L	G	V	W	D	E	A	R	T	P	Y	A	D	R	L	R	A	A	L	N	A	V	E	L	P	V	P	D	F	D	P	A	E	E
Template Known Secondary structure																	T	T	.	.	.	S		S								T	T				S												T	S	S		T	T								T	T				S											T	T	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	L	R	D	L	P	L	V	T	I	D	G	E	D	A	R	D	F	D	D	A	V	Y	C	E	K	K	R	G	G	G	W	R	L	W	V	A	I	A	D	V	S	Y	Y	V	R	P	S	T	P	L	D	R	E	A	R	N	R	G	T	S	V	Y	F	P	S	Q	V	I	P	M	L	P	E	V	L	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	D	L	T	H	L	P	T	F	A	I	D	D	E	G	N	Q	D	P	D	D	A	V	G	V	E	D	L	G	G	G	L	T	R	L	W	V	H	V	A	D	V	A	A	L	V	A	P	D	S	P	L	D	L	E	A	R	A	R	G	A	T	L	Y	L	P	D	R	T	I	G	X	L	P	D	E	L	V	A
Template Known Secondary structure						T	T	S								T	T														S	T	T											G	G	G	T			T	T	S											B					S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	C	S	L	N	P	Q	V	D	R	L	C	M	V	C	E	M	T	V	S	S	K	G	R	L	T	G	Y	K	F	Y	E	A	V	M	S	S	H	A	R	L	T	Y	T	K	V	W	H	I	L	Q	G	D	Q	D	L	R	E	Q	Y	A	P	L	V	K	H	L	E	E	L	H	N	L	Y	K	V	L	D	K
Query Conservation
Alig confidence			.																																						.																		.	.	.	.	.	.	.	.	.	.
Template Conservation			.																																						.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		K	.	A	G	L	G	L	H	E	V	S	P	A	L	S	I	C	L	D	L	D	P	D	G	N	A	E	A	V	D	V	L	L	T	R	V	K	V	Q	.	R	L	A	Y	Q	E	A	Q	A	R	L	E	A	G	E	E	P	.	.	.	.	.	.	.	.	.	.	F	V	T	L	A	R	L	A	R	A	S	R	R
Template Known Secondary structure			.		S	T	T	S	S	S	S												T	T	S																.													T	T		T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.																																						.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	E	R	G	G	I	S	F	E	S	E	E	A	K	F	I	F	N	A	E	R	R	I	E	R	I	E	Q	T	Q	R	N	D	A	H	K	L	I	E	E	C	M	I	L	A	N	I	S	A	A	R	F	V	E	K	A	K	E	P	A	L	F	R	I	H	D	K	P	S	T	E	A	I	T	S	F	R	S
Query Conservation
Alig confidence																									.	.																																																	.	.	.	.	.	.	.
Template Conservation																									.	.																																																	.	.	.	.	.	.	.
Template Sequence		L	R	E	G	E	G	A	L	S	I	D	L	P	E	V	R	V	K	A	D	E	T	G	.	.	A	S	V	F	P	L	P	K	P	E	X	R	T	V	V	Q	E	C	X	T	L	A	G	W	G	T	A	I	F	A	D	D	N	E	I	P	L	P	F	A	T	Q	D	Y	P	T	R	E	.	.	.	.	.	.	.
Template Known Secondary structure						T	T															T	T		.	.																																	T	T												S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.																																																	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	E	L	G	L	E	L	P	G	G	N	K	P	E	P	R	D	Y	A	E	L	L	E	S	V	A	D	R	P	D	A	E	M	L	Q	T	M	L	L	R	S	M	K	Q	A	I	Y	D	P	E	N	R	G	H	F	G	L	A	L	Q	S	Y	A	H	F	T	S	P	I	R	R	Y	P	D	L	T	L	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	D	T	L	P	A	X	W	A	R	R	K	T	L	A	R	T	R	F	Q	P	S	P	G	P	H	H	G	X	G	L	D	L	Y	A	Q	A	T	S	P	X	R	R	Y	L	D	L	V	V	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																		S	S				B	T	T	T	T	B	S						S		T	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	K	Y	L	L	A	K	E	Q	G	H	Q	G	N	T	T	E	T	G	G	Y	H	Y	S	M	E	E	M	L	Q	L	G	Q	H	C	S	M	A	E	R	R	A	D	E	A	T	R	D	V	A	D	W	L	K	C	D	F	M	L	D	Q
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	L	R	A	F	L	A	G	R	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	S	S	K	V	X	A	A	H	I	A	E	S	Q	X	N	A	D	A	T	R	Q	A	E	R	L	S	R	R	H	H	T	L	R	F	I	A	A	Q
Template Known Secondary structure									T	T		.	.	.	.	.	.	.	.	.	.	.	.																																								T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.													.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.