 |
Job Description | P21499 | Confidence | 95.55% | Date | Thu Jan 5 11:38:21 GMT 2012 |
Rank | 81 | Aligned Residues | 58 |
% Identity | 24% | Template | d2es2a1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.78 |
|
 |
  |   |
84 | . | . | . | . | . | 90 | . | |
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | K | G | T | V | I | G | . |
. |
H | R | D | G | Y | G | F | L | R | V | E | G | R | K | D | D | L | Y | L | S | S | E | Q | M | K | T | C | I | H | . |
. |
. |
. |
. |
G | D | Q | V | L | A | Q | P | L | G | A | D | R | K | G | R | R | E | A | R | I | V | R |
Query Conservation |   |
  |
|   |
|   |
|   |   | . | . |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |
|   | . |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   | . |   |   |   |   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
M | L | E | G | K | V | K | W | F | N | S | E | K | G | F | G | F | I | E | V | E | G | Q | D | . |
D | V | F | V | H | F | S | A | I | Q | G | E | G | F | K | T | L | E | E | G | Q | A | V | S | F | E | I | V | . |
E | G | N | R | G | P | Q | A | A | N | V | T | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |
| T | T | S |
| . |
|  |  |  |  | G | G | G | B |
| S | S | S | S |
|
|
|
| T | T |
|  |  |  |  |  |  |  | . |  |  | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|