Job Description P21499 Confidence 72.48% Date Thu Jan 5 11:38:21 GMT 2012 Rank 292 Aligned Residues 60 % Identity 25% Template d1zyba1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure														.							.	.	.	.	.	.	.
Query SS confidence														.							.	.	.	.	.	.	.
Query Sequence		R	E	F	I	L	E	H	L	T	K	R	E	.	K	P	A	S	R	D	.	.	.	.	.	.	.	E	L	A	V	E	L	H	I	E	G	E	E	Q	L	E	G	L	R	R	R	L	R	A	M	E	R	D	G	Q	L	V	F	T	R	R	Q	C	Y	A	L	P	E	R	L	D	L	V
Query Conservation														.							.	.	.	.	.	.	.
Alig confidence														.							.	.	.	.	.	.	.										.	.	.				.																			.
Template Conservation																																					.	.	.				.																			.
Template Sequence		K	S	K	I	I	R	F	F	L	S	H	C	E	K	P	Q	G	E	K	T	F	K	V	K	X	D	D	L	A	R	C	L	D	D	T	.	.	.	R	L	N	.	I	S	K	T	L	N	E	L	Q	D	N	G	L	I	E	L	H	R	.	K	E	I	L	I	P	D	A	Q	K	L	L
Template Known Secondary structure											T	T		S	S	S	S	S																T	S		.	.	.				.											T	T	S					T	.	T					S		G	G	G	G
Template Predicted Secondary structure																																					.	.	.				.																			.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions