Return to main results Retrieve Phyre Job Id

Job DescriptionP21499
Confidence89.61%DateThu Jan 5 11:38:21 GMT 2012
Rank146Aligned Residues48
% Identity8%Templated1z6ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70..
Predicted Secondary structure 















Query SS confidence 




















































Query Sequence  SREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTR
Query Conservation 
 
 

  
     
     
   
 
        
   
  
   
 
    
Alig confidence 












.















....


















Template Conservation 
   

  
   
.  

 


  



  ....


 

 

   


 
 
Template Sequence  NAGAVYRLIDQLG. PVSRIDLSRLAQLAPA. . . . SITKIVHEXLEAHLVQELG
Template Known Secondary structure  SS
.S

TT

....TS

Template Predicted Secondary structure 

.





....



Template SS confidence 




















































   17..20......... 30.........40..... ....50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions