Job Description P21499 Confidence 63.14% Date Thu Jan 5 11:38:21 GMT 2012 Rank 308 Aligned Residues 50 % Identity 18% Template d1xsva_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors YlxM/p13-like Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	N	P	I	P	S	R	E	F	I	L	E	H	L	T	K	R	E	K	P	A	S	R	D	E	L	A	V	E	L	H	I	E	G	E	E	Q	L	E	G	L	R	R	R	L	R	A	M	E	R
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		Y	Q	S	L	L	T	N	K	Q	R	N	Y	L	E	L	F	Y	L	E	D	.	Y	S	L	S	E	I	A	D	T	F	N	V	S	R	Q	A	V	Y	D	N	I	R	R	T	G	D	L	V	E	D
Template Known Secondary structure			G	G	G	S													T	S		.										T	T
Template Predicted Secondary structure																						.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions