Job Description P21499 Confidence 44.00% Date Thu Jan 5 11:38:21 GMT 2012 Rank 348 Aligned Residues 76 % Identity 11% Template d1jt8a_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution UNK

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		71	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.																													.	.													.	.
Query SS confidence												.																													.	.													.	.
Query Sequence		T	R	R	Q	C	Y	A	L	P	E	.	R	L	D	L	V	K	G	T	V	I	G	H	R	D	G	Y	G	F	L	R	V	E	G	R	K	D	D	L	.	.	Y	L	S	S	E	Q	M	K	T	C	I	H	.	.	G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	A	R	I	V	R	V	L
Query Conservation												.																													.	.													.	.
Alig confidence												.																													.	.													.	.																	.	.
Template Conservation																																																																									.	.
Template Sequence		E	Q	Q	I	R	V	R	I	P	R	K	E	E	N	E	I	L	G	I	I	E	Q	M	L	G	A	S	R	V	R	V	R	C	L	D	G	K	T	R	L	G	R	I	P	G	R	L	K	N	R	I	W	V	R	E	G	D	V	V	I	V	K	P	W	E	V	Q	G	D	Q	K	.	.	C	D	I	I	W	R	Y
Template Known Secondary structure										S			S	S										S	S		S	S								T	T																			S									B			T	T	S			.	.							S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.
		146	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	T
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions