Job Description P21499 Confidence 82.97% Date Thu Jan 5 11:38:21 GMT 2012 Rank 228 Aligned Residues 67 % Identity 22% Template d1jjga_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution UNK

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		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N	M	D	E	R	K	I	D	F	S
Query Conservation
Alig confidence											.																																											.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation											.																																											.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		G	S	V	H	E	G	I	V	Y	.	F	K	D	G	I	F	K	V	R	L	L	G	Y	E	G	H	E	C	I	L	L	D	Y	L	N	Y	R	Q	D	T	L	D	R	L	K	E	R	L	V	G	R	V	.	.	.	.	.	.	.	.	.	.	I	K	T	R	V	V	R	A	D	G	L	.	.	Y	V	D	L	R
Template Known Secondary structure		S									.			T	T							T	T	T	S	S							T	T			S	S												T	T			.	.	.	.	.	.	.	.	.	.										S	S	.	.
Template Predicted Secondary structure											.																																											.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions