Job Description P21499 Confidence 98.84% Date Thu Jan 5 11:38:21 GMT 2012 Rank 35 Aligned Residues 76 % Identity 12% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N	M	D	E	R	K	I	D
Query Conservation
Alig confidence																										.																.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	G	S	I	I	P	V	R	V	E	R	F	W	H	N	D	I	I	C	T	T	N	S	.	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	.	.	.	.	.	.	.	.	.	.	L	R	R	P	A	N	E	I	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I	D	Y	A	N	I	T	A	E
Template Known Secondary structure			T	T												S	S							T	T	.	S							T	T	S	S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	S		S		S	T	T	T	S		T	T												G	G	G	T
Template Predicted Secondary structure																										.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.		.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.											.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
		722	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	L	I	S	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	L	L	D	H	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1202	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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