Job Description P21499 Confidence 25.98% Date Thu Jan 5 11:38:21 GMT 2012 Rank 404 Aligned Residues 83 % Identity 13% Template c3k1rA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																		.	.				.	.	.	.	.	.
Query SS confidence																		.	.				.	.	.	.	.	.
Query Sequence		H	R	D	G	Y	G	F	L	R	V	E	G	R	K	D	D	.	.	L	Y	L	.	.	.	.	.	.	S	S	E	Q	M	K	T	C	I	H	G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	A	R	I	V	R	V	L	V	P	K	T	S	Q	I	V	G	R	Y	F	T	E	A	G	V	G
Query Conservation																		.	.				.	.	.	.	.	.
Alig confidence																		.	.				.	.	.	.	.	.															.																					.
Template Conservation																																											.																					.
Template Sequence		H	P	E	G	L	G	L	S	V	R	G	G	L	E	F	G	C	G	L	F	I	S	H	L	I	K	G	G	Q	A	D	S	V	G	L	Q	V	G	D	E	I	.	V	R	I	N	G	Y	S	I	S	S	C	T	H	E	E	V	I	N	L	I	.	R	T	E	K	T	V	S	I	K	V	R	H	I	G	L	I	P
Template Known Secondary structure		S	T	T										G	G	G	T										T	T	S					T	T			T	T				.				T	T				T	T											.	T	S	S	S
Template Predicted Secondary structure																																											.																					.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		164	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	V	P	D	D	S	R	L	S	F	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	S	S	P	D	E	P	L	T	W	Q	Y
Template Known Secondary structure				S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions