Job Description P21499 Confidence 98.20% Date Thu Jan 5 11:38:21 GMT 2012 Rank 49 Aligned Residues 91 % Identity 15% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

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		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.									.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		M	L	D	Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	.	.	.	.	.	.	.	.	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																												.	.																											.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		F	R	P	F	R	G	E	V	M	L	G	K	I	K	S	C	S	E	E	G	I	R	V	T	I	S	.	.	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I
Template Known Secondary structure						T	T												T	T							S	.	.	S								G	G	G	B		T	T					G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		711	.	.	.	.	.	.	.	.				720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		E	A	V	N	M	D	E	R	K	.	.	.	I	D	F	S	L	I	S	S	E	R	A	P
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		E	S	E	D	F	V	D	V	S	P	Y	T	L	I	A	S	C	S	R	D	G	L	G	I
Template Known Secondary structure											S							B		S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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