Job Description P21499 Confidence 29.58% Date Thu Jan 5 11:38:21 GMT 2012 Rank 391 Aligned Residues 47 % Identity 15% Template c2zkrt_ PDB info PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																				.																.	.
Query SS confidence																				.																.	.
Query Sequence		G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	.	A	R	I	V	R	V	L	V	P	K	T	S	Q	I	V	.	.	G	R	Y	F	T	E	A	G	V	G	F	V	V	P	D	D	S
Query Conservation																				.																.	.
Alig confidence									.	.	.									.																.	.
Template Conservation									.	.	.
Template Sequence		D	D	E	V	Q	V	V	.	.	.	R	G	H	Y	K	G	Q	Q	I	G	K	V	V	Q	V	Y	R	K	K	Y	V	I	Y	I	E	R	V	Q	R	E	K	A	N	G	T	T	V	H	V	G	I	H	P
Template Known Secondary structure		T							.	.	.	S	S	T	T	T	T			S								T	T	T	T					T	T						S	S								B		G
Template Predicted Secondary structure									.	.	.
Template SS confidence
		52	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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