Job Description P21499 Confidence 96.82% Date Thu Jan 5 11:38:21 GMT 2012 Rank 66 Aligned Residues 66 % Identity 24% Template c2ytxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		L	P	E	R	L	D	L	V	K	G	T	V	I	G	H	R	D	G	Y	G	F	L	R	V	E	G	R	K	D	D	L	Y	L	S	S	E	Q	M	.	.	.	.	K	T	C	I	H	G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	A	R	I	V	R	V	L
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.															.	.
Template Conservation																																																										.	.
Template Sequence		L	K	K	K	Q	A	R	C	Q	G	V	V	C	A	M	K	E	A	F	G	F	I	E	R	G	D	V	V	K	E	I	F	F	H	Y	S	E	F	K	G	D	L	E	T	L	Q	P	G	D	D	V	E	F	T	I	K	.	.	D	R	N	G	K	E	V	A	T	D	V	R	L	L
Template Known Secondary structure																		S	S							S	S	S								T	T	T			S		T	T	S			S										.	.			S	S	S		B
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions