Job Description P21499 Confidence 93.90% Date Thu Jan 5 11:38:21 GMT 2012 Rank 101 Aligned Residues 74 % Identity 23% Template c2ytvA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fifth cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																										.																					.	.	.
Query SS confidence																										.																					.	.	.
Query Sequence		A	L	P	E	R	L	D	L	V	K	G	T	V	I	G	H	R	D	G	Y	G	F	L	R	.	V	E	G	R	K	D	D	L	Y	L	S	S	E	Q	M	K	T	C	I	H	.	.	.	G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	A	R	I	V	R	V	L	V	P	K	T	S
Query Conservation																										.																					.	.	.
Alig confidence																										.																					.	.	.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	L	R	R	A	T	V	E	C	V	K	D	Q	F	G	F	I	N	Y	E	V	G	D	S	K	K	L	F	F	H	V	K	E	V	Q	D	G	I	E	L	Q	A	G	D	E	V	E	F	S	V	I	L	N	Q	R	T	G	K	C	S	A	C	N	V	W	R	V	S	G	P	S	S
Template Known Secondary structure								S	B										S	S					S				S	S	S	S	S					T	T	T			S	S					T	T						B					S	S	S							S					S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions