Job Description P21499 Confidence 23.16% Date Thu Jan 5 11:38:21 GMT 2012 Rank 411 Aligned Residues 39 % Identity 10% Template c2xnqA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structural insights into cis element recognition of non-2 polyadenylated rnas by the nab3-rrm Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	G	Y	G	F	L	R	V	E	G	R	K	D	D	L	Y	L	S	S	E	Q	M	K	T	C	I	H	G	D	Q	V	L	A	Q	P	L	G	A	D
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		K	N	A	F	G	F	I	Q	F	D	N	.	P	Q	S	V	R	D	A	I	E	E	S	Q	E	M	N	F	G	K	K	L	I	L	E	V	S	S	S	N
Template Known Secondary structure			S	S							S	S	.											T	T	S			T	T
Template Predicted Secondary structure													.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions