Job Description P21499 Confidence 97.04% Date Thu Jan 5 11:38:21 GMT 2012 Rank 61 Aligned Residues 78 % Identity 19% Template c2nn6I_ PDB info PDB header:hydrolase/transferase Chain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.								.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	.	.	.	.	.	.	.	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		D	V	G	A	I	V	T	C	K	V	S	S	I	N	S	R	F	A	K	V	H	I	L	Y	V	G	S	M	P	L	K	N	S	F	R	G	T	I	R	K	E	D	V	R	A	T	E	K	D	K	V	E	I	Y	K	S	.	.	.	.	.	.	.	.	.	F	R	P	G	D	I	V	L	A	K	V	I	S	L	G
Template Known Secondary structure			T	T												S	S									S	S	S	S					S	S		S						G	G	G	T		S	S					G	G	G	T	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	E	R	K	I	D	F	S	L	I	S	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	Q	S	N	Y	L	L	T	T	A	E	N	E
Template Known Secondary structure		T	T	T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions