Job Description P21499 Confidence 100.00% Date Thu Jan 5 11:38:21 GMT 2012 Rank 1 Aligned Residues 625 % Identity 25% Template c2ix1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exoribonuclease 2; PDBTitle: rnase ii d209n mutant Resolution 2.74 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	A	L	P	E	R	L	D	L	V	K	G	T	V	I	G	H	R	D	G	Y	G	F	L	R	V	E	G	R	K	D	D	L	Y	L	S	S	E	Q	M	K	T	C	I	H	G	D	Q	V	L	A	Q	P	L	G	A	D	R	K	G	R	R	E	A	R	I	V	R	V	L	V	P	K	T	S	Q	I	V	G
Query Conservation
Alig confidence																															.																										.	.
Template Conservation																															.																										.	.
Template Sequence		K	Q	Q	L	H	S	Q	T	P	R	A	E	G	V	V	K	A	T	E	K	G	F	G	F	L	E	V	D	A	.	Q	K	S	Y	F	I	P	P	P	Q	M	K	K	V	M	H	G	D	R	I	I	A	V	I	H	.	.	S	E	K	E	R	E	S	A	E	P	E	E	L	V	E	P	F	L	T	R	F	V	G
Template Known Secondary structure							T	T	S											S	S	S								T	.	T											T	T			T	T									.	.			S	S	S												S		S
Template Predicted Secondary structure																															.																										.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.	.																					.
Query SS confidence																													.	.																					.
Query Sequence		R	Y	F	T	E	A	G	V	G	F	V	V	P	D	D	S	R	L	S	F	D	I	L	I	P	P	D	.	.	Q	I	M	G	A	R	M	G	F	V	V	V	V	E	L	T	Q	R	P	T	.	R	R	T	K	A	V	G	K	I	V	E	V	L	G	D	N	M	G	T	G	M	A	V	D	I	A	L	R	T	H
Query Conservation																													.	.																					.
Alig confidence																													.	.																					.
Template Conservation
Template Sequence		K	V	Q	G	K	N	D	R	L	A	I	V	P	D	H	P	L	L	K	D	A	I	P	C	R	A	A	R	G	L	N	H	E	F	K	E	G	D	W	A	V	A	E	M	R	R	H	P	L	K	G	D	R	S	F	Y	A	E	L	T	Q	Y	I	T	F	G	D	D	H	F	V	P	W	W	V	T	L	A	R	H
Template Known Secondary structure							T	T							S	S	T	T											T	T							T	T											G	G	G	T		S	S												T	T		T	T										T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	P	Y	I	W	P	Q	A	V	E	Q	Q	V	A	G	L	K	E	E	V	P	E	E	A	K	A	G	R	V	D	L	R	D	L	P	L	V	T	I	D	G	E	D	A	R	D	F	D	D	A	V	Y	C	E	K	K	R	G	G	G	W	R	L	W	V	A	I	A	D	V	S	Y	Y	V	R	P	S	T	P
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		N	L	E	K	E	A	P	D	G	V	A	T	E	M	.	.	.	.	.	.	.	.	L	D	E	G	L	V	R	E	D	L	T	A	L	D	F	V	T	I	D	S	A	S	T	E	D	M	N	D	A	L	F	A	K	A	L	P	D	D	K	L	Q	L	I	V	A	I	A	D	P	T	A	W	I	A	E	G	S	K
Template Known Secondary structure		T				S										.	.	.	.	.	.	.	.				S							T	T	S			B					T	T														T	T	T											G	G	G	T	S		T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		L	D	R	E	A	R	N	R	G	T	S	V	Y	F	P	S	Q	V	I	P	M	L	P	E	V	L	S	N	G	L	C	S	L	N	P	Q	V	D	R	L	C	M	V	C	E	M	T	V	S	S	K	G	R	L	T	G	.	Y	K	F	Y	E	A	V	M	S	S	H	A	R	L	T	Y	T	K	V	W	H	I	L
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		L	D	K	A	A	K	I	R	A	F	T	N	Y	L	P	G	F	N	I	P	M	L	P	R	E	L	S	D	D	L	C	S	L	R	A	N	E	V	R	P	V	L	A	C	R	M	T	L	S	A	D	G	T	I	E	D	N	I	E	F	F	A	A	T	I	E	S	K	A	K	L	V	Y	D	Q	V	S	D	W	L
Template Known Secondary structure									S		B					T	T					S	S						T	T	T	S	S			B	T	S													T	T			B		S											B	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	D	Q	D	L	R	E	Q	Y	A	P	L	V	K	H	L	E	E	L	H	N	L	Y	K	V	L	D	K	A	R	E	E	R	G	G	I	S	F	E	S	E	E	A	K	F	I	F	N	A	E	R	R	I	E	R	I	E	Q	T	Q	R	N	D	A	H	K	L	I	E	E	C	M	I	L	A	N	I	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	T	G	D	W	Q	P	E	S	E	A	I	A	E	Q	V	R	L	L	A	Q	I	C	Q	R	R	G	E	W	R	H	N	H	A	L	V	F	K	D	R	P	D	Y	R	F	I	L	G	E	K	G	E	V	L	D	I	V	A	E	P	R	R	I	A	N	R	I	V	E	E	A	M	I	A	A	N	I	C	A
Template Known Secondary structure		T	T		S	S				S	S																									S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	V	E	K	A	K	E	P	A	L	F	R	I	H	D	K	P	S	T	E	A	I	T	S	F	R	S	V	L	A	E	L	G	L	E	L	P	G	G	N	K	P	E	P	R	D	Y	A	E	L	L	E	S	V	A	D	R	P	D	A	E	M	L	Q	T	M	L	L	R	S	M	K	Q	A	I	Y	D	P
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		A	R	V	L	R	D	K	L	G	F	G	I	Y	N	V	H	M	G	F	D	P	A	N	A	D	A	L	A	A	L	L	K	T	H	G	L	H	V	D	A	E	E	V	L	T	L	D	G	F	C	K	L	R	R	E	L	D	A	Q	P	T	G	.	F	L	D	S	R	I	R	R	F	Q	S	F	A	E	I	S	T
Template Known Secondary structure									T	S							B		S	B		G	G	G											T	T					T	T	G	G	G	S													T	S	S	S	S	.							G	G	G	B							S
Template Predicted Secondary structure																																																																.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	R	G	H	F	G	L	A	L	Q	S	Y	A	H	F	T	S	P	I	R	R	Y	P	D	L	T	L	H	R	A	I	K	Y	L	L	A	K	E	Q	G	H	Q	G	N	T	T	E	T	G	G	Y	H	Y	S	M	E	E	M	L	Q	L	G	Q	H	C	S	M	A	E	R	R	A	D	E	A	T	R	D	V
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	G	P	H	F	G	L	G	L	E	A	Y	A	T	W	T	S	P	I	R	K	Y	G	D	M	I	N	H	R	L	L	K	A	V	I	K	G	E	T	A	T	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	E	I	T	V	Q	M	A	E	R	R	R	L	N	R	M	A	E	R	D	V
Template Known Secondary structure		S				B	T	T	T	T	B	S						S		T	T	S	B																T							.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.															.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.			.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.		.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																						.
Query SS confidence																		.	.																																						.
Query Sequence		A	D	W	L	K	C	D	F	M	L	D	Q	V	G	N	V	.	.	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	.	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E
Query Conservation																		.	.																																						.
Alig confidence																		.	.																																						.
Template Conservation
Template Sequence		G	D	W	L	Y	A	R	F	L	K	D	K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D
Template Known Secondary structure											G	G	G	T	T	S													T	T							T	T	T								G	G	G	G		S		G	G	G					T	T	T	T					T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	E	A	V	N	M	D	E	R	K	I	D	F	S	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	I	A	E	V	R	M	E	T	R	S	I	I	A	R	P	V
Template Known Secondary structure									G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.