Return to main results Retrieve Phyre Job Id

Job DescriptionP21499
Confidence98.92%DateThu Jan 5 11:38:21 GMT 2012
Rank31Aligned Residues88
% Identity27%Templatec2eqsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent rna helicase dhx8; PDBTitle: solution structure of the s1 rna binding domain of human2 atp-dependent rna helicase dhx8
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   642.......650.........660...... ...670.........680.........690.........700.........710.........
Predicted Secondary structure 








..
























Query SS confidence 
























. .




















































Query Sequence  QVGNVFKGVISSVTGFGFFVRLDDL. . FIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERK
Query Conservation   


 
 
 

 
   
 

 
   .. 




 
  
  
 
  
     


   
  
 


 
 
 
  

     
Alig confidence 
























..
















..........




















..


Template Conservation   

 

 
 
  
   
 

 
     
       
        ..........         

 
   

 

..  
Template Sequence  TIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRV. . . . . . . . . . ANVADVVSKGQRVKVKVLSFT. . GTK
Template Known Secondary structure 
TT

SS

SSSS


GGGTSSSS

..........



TT
..TT
Template Predicted Secondary structure 





















..........






..

Template SS confidence 















































































   263......270.........280.........290.........300...... ...310.........320....... ..330
 
   720.........730.........740.
Predicted Secondary structure 
















Query SS confidence 





















Query Sequence  IDFSLISSERAPRNVGKTAREK
Query Conservation 


 

                
Alig confidence 





















Template Conservation 
 

 
               
Template Sequence  TSLSMKDVDQETGEDLNPNRRR
Template Known Secondary structure  STTB
TTT

B

SS


Template Predicted Secondary structure 











Template SS confidence 





















   331........340.........350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions