 |
Job Description | P21499 | Confidence | 73.59% | Date | Thu Jan 5 11:38:21 GMT 2012 |
Rank | 284 | Aligned Residues | 58 |
% Identity | 21% | Template | c2c4rL_ |
PDB info |
PDB header:hydrolase | Chain: L: PDB Molecule:ribonuclease e; |
PDBTitle: catalytic domain of e. coli rnase e
|
Resolution | 3.6 Å |
|
 |
  |   |
643 | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | |
|
. | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | N | V | F | K | G | V | I | S | S | V | T | G | F | . |
. |
G | F | F | V | R | L | D | D | L | F | I | D | G | L | V | H | V | S | S | L | D | N | D | Y | Y | R | F | D | Q | V | G | Q | R | L | M | G | E | S | S | G | Q | T | Y | R | L | G | D | R | V | E | V | R | V | E | A |
Query Conservation |   |
|
|
|   |
|   |
|   |
|
|   |
|   |   |   | . | . |
|   |
|
|   |
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   | . |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|   |
|
Template Sequence |   |
K | A | N | I | Y | K | G | K | I | T | R | I | E | P | S | L | E | A | A | F | V | D | Y | G | A | . |
E | R | H | G | F | L | P | L | K | E | I | A | R | E | Y | F | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | K | D | V | L | R | E | G | Q | E | V | I | V | Q | I | D | K |
Template Known Secondary structure |   |
T | T |
|  |  |
| B | B |
| S |
|
| B | T | T | T | T |  |  |  |  | B | S | S | S | . | S | S |
|  |  |  |  | T | T | T |
|
| S | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
| S | S |
|
| B |
|
|  |  | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|