Job Description P21499 Confidence 99.35% Date Thu Jan 5 11:38:21 GMT 2012 Rank 15 Aligned Residues 86 % Identity 12% Template c2c35F_ PDB info PDB header:polymerase Chain: F: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: subunits rpb4 and rpb7 of human rna polymerase ii Resolution 2.70 Å

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		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		C	D	F	M	L	D	Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	.	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N
Query Conservation																																																.
Alig confidence																															.	.																.
Template Conservation																															.	.
Template Sequence		A	I	V	F	R	P	F	K	G	E	V	V	D	A	V	V	T	Q	V	N	K	V	G	L	F	T	E	I	G	.	.	P	M	S	C	F	I	S	R	H	S	I	P	S	E	M	E	F	D	P	N	S	N	P	P	C	Y	K	T	M	D	E	D	I	V	I	Q	Q	D	D	E	I	R	L	K	I	V	G	T	R
Template Known Secondary structure									T	T												T	T							T	.	.	T							G	G	G	S		S	S					S	S	S	S	S						T	T	S	S					T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		715	.	.	.	.	720	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	E	R	K	I	D	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	K	N	D	I	F	A	I
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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