Job Description P21499 Confidence 97.72% Date Thu Jan 5 11:38:21 GMT 2012 Rank 55 Aligned Residues 73 % Identity 19% Template c2ba0A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:archeal exosome rna binding protein rrp4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.			700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	.	.	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N	M	D	E	R	K
Query Conservation																																																												.	.
Alig confidence																											.															.	.	.	.	.	.	.	.	.	.	.	.							.	.																		.
Template Conservation																											.															.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		S	V	G	D	V	V	I	G	I	I	R	E	V	A	A	N	G	W	A	V	D	I	Y	S	P	.	Y	Q	A	F	L	P	V	S	E	N	P	E	M	K	.	.	.	.	.	.	.	.	.	.	.	.	P	N	K	K	P	N	E	V	L	D	I	G	D	A	I	I	A	K	V	L	N	I	D	P	K	.	M	K
Template Known Secondary structure			T	T												S	S							S	S	S	.	S						G	G	G		T	T			.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G	T			T	T												T	T	.
Template Predicted Secondary structure																											.															.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.													.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.
		720	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	F	S	L	I	S	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	L	T	M	K	D	R	I
Template Known Secondary structure								S	S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions