Job Description P21499 Confidence 22.04% Date Thu Jan 5 11:38:21 GMT 2012 Rank 419 Aligned Residues 47 % Identity 11% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		R	E	F	I	L	E	H	L	T	K	R	E	K	P	.	.	.	.	.	.	A	S	R	D	E	L	A	V	E	L	H	I	E	G	E	E	Q	L	E	G	L	R	R	R	L	R	A	M	E	R	D	G	Q	L	V	F	T
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																				.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		K	E	K	L	V	D	L	I	G	D	N	P	G	S	D	L	L	R	L	T	Q	I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	.	.	.	.	V	L	Q	N	C	V	D	E	G	D	L	L	I	D
Template Known Secondary structure												S		S	B											T	S		T	T											.	.	.	.									T	S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions