Job Description P21499 Confidence 99.16% Date Thu Jan 5 11:38:21 GMT 2012 Rank 21 Aligned Residues 82 % Identity 20% Template c1nt9G_ PDB info PDB header:transcription, transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide; PDBTitle: complete 12-subunit rna polymerase ii Resolution 4.20 Å

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		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	F	M	L	D	Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E	S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N	M
Query Conservation
Alig confidence																															.	.																	.
Template Conservation																															.	.																	.
Template Sequence		A	V	V	F	K	P	F	K	G	E	V	V	D	G	T	V	V	S	C	S	Q	H	G	F	E	V	Q	V	G	.	.	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	.	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G	C	I	S
Template Known Secondary structure									T	T												T	T							S	.	.	S	S						T	T	T	S	S	S	S			.		B	T	T					S	S	S						S	S														S
Template Predicted Secondary structure																															.	.																	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		716	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	R	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	S	S	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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