Job Description P21499 Confidence 98.57% Date Thu Jan 5 11:38:21 GMT 2012 Rank 44 Aligned Residues 91 % Identity 14% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

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		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	S	M	A	E	R	R	A	D	E	A	T	R	D	V	A	D	W	L	K	C	D	F	M	L	D	Q	V	G	N	V	F	K	G	V	I	S	S	V	T	G	F	G	F	F	V	R	L	D	D	L	F	I	D	G	L	V	H	V	S	S	L	D	N	D	Y	Y	R	F	D	Q	V	G	Q	R	L	M	G	E
Query Conservation
Alig confidence																																																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	Q	T	A	K	Q	V	L	I	Q	R	I	R	E	L	E	K	E	K	Q	F	E	K	Y	S	E	L	K	G	T	V	T	T	A	E	V	I	R	V	X	G	E	W	A	D	I	R	I	G	.	.	K	L	E	T	R	L	P	K	K	E	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																												T	T	T	T	S											S	S							T	.	.	T							G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	G	Q	T	Y	R	L	G	D	R	V	E	V	R	V	E	A	V	N	M	D	E	R	K	I	D	F	S	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	G	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V	K	T	T	K	G	P	K	I	L	V
Template Known Secondary structure		.	T	T					T	T														T	T
Template Predicted Secondary structure		.
Template SS confidence
			168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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